RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 GCKRQ14397 625 aa20.42■□□□□ 0.86
LMX1B-204ENST00000561065 GREM2Q9H772 168 aa20.42■□□□□ 0.86
LMX1B-204ENST00000561065 MKRN1Q9UHC7 482 aaKnown RBP20.42■□□□□ 0.86
LMX1B-204ENST00000561065 CNTNAP1P78357 1384 aa20.42■□□□□ 0.86
LMX1B-204ENST00000561065 USP50Q70EL3 339 aaPredicted RBP20.41■□□□□ 0.86
LMX1B-204ENST00000561065 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
LMX1B-204ENST00000561065 KCNQ5Q9NR82 932 aa20.41■□□□□ 0.86
LMX1B-204ENST00000561065 ADARB2Q9NS39 739 aaKnown RBP20.41■□□□□ 0.86
LMX1B-204ENST00000561065 F6X3S4 739 aa20.4■□□□□ 0.86
LMX1B-204ENST00000561065 PSMD14O00487 310 aa20.4■□□□□ 0.86
LMX1B-204ENST00000561065 ECE2O60344 883 aa20.4■□□□□ 0.86
LMX1B-204ENST00000561065 UFL1O94874 794 aa20.4■□□□□ 0.86
LMX1B-204ENST00000561065 DOK7Q18PE1 504 aa20.4■□□□□ 0.86
LMX1B-204ENST00000561065 TRPM4Q8TD43 1214 aa20.4■□□□□ 0.86
LMX1B-204ENST00000561065 ZBTB12Q9Y330 459 aaPredicted RBP20.4■□□□□ 0.86
LMX1B-204ENST00000561065 ANKRD18AQ8IVF6 992 aa20.39■□□□□ 0.85
LMX1B-204ENST00000561065 LINS1Q8NG48 757 aa20.39■□□□□ 0.85
LMX1B-204ENST00000561065 WTIPA6NIX2 430 aaPredicted RBP20.38■□□□□ 0.85
LMX1B-204ENST00000561065 TMEM88BA6NKF7 163 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 CCER2I3L3R5 266 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 HIRAP54198 1017 aaPredicted RBP20.38■□□□□ 0.85
LMX1B-204ENST00000561065 TNIP1Q15025 636 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 EYA3Q99504 573 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 THSD7BQ9C0I4 1608 aa20.38■□□□□ 0.85
LMX1B-204ENST00000561065 TRAF5O00463 557 aa20.37■□□□□ 0.85
LMX1B-204ENST00000561065 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
LMX1B-204ENST00000561065 CDC5LQ99459 802 aaKnown RBP20.37■□□□□ 0.85
LMX1B-204ENST00000561065 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
LMX1B-204ENST00000561065 XDHP47989 1333 aa20.37■□□□□ 0.85
LMX1B-204ENST00000561065 BEND3Q5T5X7 828 aa20.36■□□□□ 0.85
LMX1B-204ENST00000561065 MICALL2Q8IY33 904 aa20.36■□□□□ 0.85
LMX1B-204ENST00000561065 EGFRP00533 1210 aa20.35■□□□□ 0.85
LMX1B-204ENST00000561065 HSPA1AP0DMV8 641 aaKnown RBP20.35■□□□□ 0.85
LMX1B-204ENST00000561065 HSPA1BP0DMV9 641 aaKnown RBP20.35■□□□□ 0.85
LMX1B-204ENST00000561065 CNOT7Q9UIV1 285 aaKnown RBP20.35■□□□□ 0.85
LMX1B-204ENST00000561065 MINPP1Q9UNW1 487 aa20.35■□□□□ 0.85
LMX1B-204ENST00000561065 ZNF609O15014 1411 aa20.34■□□□□ 0.85
LMX1B-204ENST00000561065 ZC3H12CQ9C0D7 883 aaKnown RBP20.34■□□□□ 0.85
LMX1B-204ENST00000561065 BSDC1Q9NW68 430 aaPredicted RBP20.34■□□□□ 0.85
LMX1B-204ENST00000561065 POLR2AP24928 1970 aaKnown RBP20.34■□□□□ 0.85
LMX1B-204ENST00000561065 CSF1RP07333 972 aa20.33■□□□□ 0.85
LMX1B-204ENST00000561065 ITGA6P23229 1130 aa20.33■□□□□ 0.85
LMX1B-204ENST00000561065 GLIS2Q9BZE0 524 aaPredicted RBP20.33■□□□□ 0.85
LMX1B-204ENST00000561065 PGAP2Q9UHJ9 254 aa20.33■□□□□ 0.85
LMX1B-204ENST00000561065 MED23Q9ULK4 1368 aa20.33■□□□□ 0.84
LMX1B-204ENST00000561065 RASSF10A6NK89 507 aa20.32■□□□□ 0.84
LMX1B-204ENST00000561065 VEGFBP49765 207 aa20.32■□□□□ 0.84
LMX1B-204ENST00000561065 SAMD7Q7Z3H4 446 aa20.32■□□□□ 0.84
LMX1B-204ENST00000561065 DPF2Q92785 391 aa20.32■□□□□ 0.84
LMX1B-204ENST00000561065 ATP2B4P23634 1241 aa20.31■□□□□ 0.84
LMX1B-204ENST00000561065 FOXO4P98177 505 aa20.31■□□□□ 0.84
LMX1B-204ENST00000561065 CST9Q5W186 159 aa20.31■□□□□ 0.84
LMX1B-204ENST00000561065 VIL1P09327 827 aaKnown RBP20.3■□□□□ 0.84
LMX1B-204ENST00000561065 KLRK1P26718 216 aa20.3■□□□□ 0.84
LMX1B-204ENST00000561065 TBC1D10BQ4KMP7 808 aaPredicted RBP20.3■□□□□ 0.84
LMX1B-204ENST00000561065 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
LMX1B-204ENST00000561065 RPS12P25398 132 aaKnown RBP20.29■□□□□ 0.84
LMX1B-204ENST00000561065 CCT4P50991 539 aaKnown RBP20.29■□□□□ 0.84
LMX1B-204ENST00000561065 COL13A1Q5TAT6 717 aaPredicted RBP20.29■□□□□ 0.84
LMX1B-204ENST00000561065 ABT1Q9ULW3 272 aaKnown RBP20.29■□□□□ 0.84
LMX1B-204ENST00000561065 H7C1D1 291 aa20.28■□□□□ 0.84
LMX1B-204ENST00000561065 GRM8O00222 908 aa20.28■□□□□ 0.84
LMX1B-204ENST00000561065 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
LMX1B-204ENST00000561065 IFFO2Q5TF58 517 aa20.28■□□□□ 0.84
LMX1B-204ENST00000561065 DIEXFQ68CQ4 756 aaKnown RBP20.28■□□□□ 0.84
LMX1B-204ENST00000561065 DLK2Q6UY11 383 aa20.28■□□□□ 0.84
LMX1B-204ENST00000561065 TXNRD3Q86VQ6 643 aa20.28■□□□□ 0.84
LMX1B-204ENST00000561065 MRPL50Q8N5N7 158 aaKnown RBP20.28■□□□□ 0.84
LMX1B-204ENST00000561065 ZC3H15Q8WU90 426 aaKnown RBP20.28■□□□□ 0.84
LMX1B-204ENST00000561065 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
LMX1B-204ENST00000561065 E9PSI1 815 aa20.27■□□□□ 0.84
LMX1B-204ENST00000561065 SLFN5Q08AF3 891 aa20.27■□□□□ 0.84
LMX1B-204ENST00000561065 ASTN2O75129 1339 aaPredicted RBP20.27■□□□□ 0.84
LMX1B-204ENST00000561065 DEFB115Q30KQ5 88 aa20.27■□□□□ 0.83
LMX1B-204ENST00000561065 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.83
LMX1B-204ENST00000561065 GMLQ99445 158 aa20.27■□□□□ 0.83
LMX1B-204ENST00000561065 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 G3V3G9 751 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 SNAP23O00161 211 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 CELF2O95319 508 aaKnown RBP20.26■□□□□ 0.83
LMX1B-204ENST00000561065 CHRNDQ07001 517 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 KIF4BQ2VIQ3 1234 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 DCAF8Q5TAQ9 597 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 TLL2Q9Y6L7 1015 aa20.26■□□□□ 0.83
LMX1B-204ENST00000561065 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 ALDH1L1O75891 902 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
LMX1B-204ENST00000561065 RBM26Q5T8P6 1007 aaKnown RBP20.25■□□□□ 0.83
LMX1B-204ENST00000561065 LMBR1LQ6UX01 489 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 PODNQ7Z5L7 613 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 MXD3Q9BW11 206 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 SRCIN1Q9C0H9 1055 aa20.25■□□□□ 0.83
LMX1B-204ENST00000561065 ZNF804BA4D1E1 1349 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms