RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 GSE1Q14687 1217 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 TTC39AQ5SRH9 613 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 RC3H1Q5TC82 1133 aaKnown RBP19.66■□□□□ 0.74
MEIS3-209ENST00000561040 SUSD4Q5VX71 490 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 RASEFQ8IZ41 740 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 CNNM1Q9NRU3 951 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 HELLSQ9NRZ9 838 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 SCN7AQ01118 1682 aa19.66■□□□□ 0.74
MEIS3-209ENST00000561040 ATP2B3Q16720 1220 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 SYNE4Q8N205 404 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 XAGE2Q96GT9 111 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 TTC14Q96N46 770 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 MROH5Q6ZUA9 1318 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 VPS53Q5VIR6 699 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
MEIS3-209ENST00000561040 EDC3Q96F86 508 aaKnown RBP19.65■□□□□ 0.74
MEIS3-209ENST00000561040 ZNF512BQ96KM6 892 aaPredicted RBP19.65■□□□□ 0.74
MEIS3-209ENST00000561040 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
MEIS3-209ENST00000561040 CCDC85AQ96PX6 553 aaPredicted RBP19.65■□□□□ 0.74
MEIS3-209ENST00000561040 ZSWIM6Q9HCJ5 1215 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 CYP46A1Q9Y6A2 500 aa19.65■□□□□ 0.74
MEIS3-209ENST00000561040 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
MEIS3-209ENST00000561040 GOLGA6L22H0YM25 854 aa19.64■□□□□ 0.73
MEIS3-209ENST00000561040 GOLIM4O00461 696 aa19.64■□□□□ 0.73
MEIS3-209ENST00000561040 TAF5LO75529 589 aa19.64■□□□□ 0.73
MEIS3-209ENST00000561040 KRT32Q14532 448 aa19.64■□□□□ 0.73
MEIS3-209ENST00000561040 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
MEIS3-209ENST00000561040 USPL1Q5W0Q7 1092 aa19.64■□□□□ 0.73
MEIS3-209ENST00000561040 NIP7Q9Y221 180 aaKnown RBP eCLIP19.64■□□□□ 0.73
MEIS3-209ENST00000561040 LY75O60449 1722 aa19.63■□□□□ 0.73
MEIS3-209ENST00000561040 ZFYP08048 801 aaPredicted RBP19.63■□□□□ 0.73
MEIS3-209ENST00000561040 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
MEIS3-209ENST00000561040 SSFA2P28290 1259 aa19.63■□□□□ 0.73
MEIS3-209ENST00000561040 CCDC152Q4G0S7 254 aa19.63■□□□□ 0.73
MEIS3-209ENST00000561040 LINC00116Q8NCU8 138 aa19.63■□□□□ 0.73
MEIS3-209ENST00000561040 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
MEIS3-209ENST00000561040 SBF2Q86WG5 1849 aa19.63■□□□□ 0.73
MEIS3-209ENST00000561040 SLC27A2O14975 620 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 NTSR2O95665 410 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 ZSCAN31Q96LW9 406 aaPredicted RBP19.62■□□□□ 0.73
MEIS3-209ENST00000561040 JAKMIP1Q96N16 626 aaKnown RBP19.62■□□□□ 0.73
MEIS3-209ENST00000561040 LIMCH1Q9UPQ0 1083 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 RPAP1Q9BWH6 1393 aaPredicted RBP19.62■□□□□ 0.73
MEIS3-209ENST00000561040 ATRNO75882 1429 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 PDE8BO95263 885 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 CYP2E1P05181 493 aaPredicted RBP19.62■□□□□ 0.73
MEIS3-209ENST00000561040 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 UBE2Q2Q8WVN8 375 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
MEIS3-209ENST00000561040 MYH7P12883 1935 aa19.62■□□□□ 0.73
MEIS3-209ENST00000561040 ONECUT3O60422 494 aaPredicted RBP19.61■□□□□ 0.73
MEIS3-209ENST00000561040 ZNF589Q86UQ0 364 aaPredicted RBP19.61■□□□□ 0.73
MEIS3-209ENST00000561040 VGLL2Q8N8G2 317 aa19.61■□□□□ 0.73
MEIS3-209ENST00000561040 RNF113AO15541 343 aaKnown RBP19.6■□□□□ 0.73
MEIS3-209ENST00000561040 AK2P54819 239 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 SKOR2Q2VWA4 1001 aaPredicted RBP19.6■□□□□ 0.73
MEIS3-209ENST00000561040 ZMYM1Q5SVZ6 1142 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 ZGPATQ8N5A5 531 aaKnown RBP19.6■□□□□ 0.73
MEIS3-209ENST00000561040 ALDH8A1Q9H2A2 487 aaPredicted RBP19.6■□□□□ 0.73
MEIS3-209ENST00000561040 SH2B1Q9NRF2 756 aaPredicted RBP19.6■□□□□ 0.73
MEIS3-209ENST00000561040 PDRG1Q9NUG6 133 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 AFF2P51816 1311 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 PUM3Q15397 648 aaKnown RBP19.6■□□□□ 0.73
MEIS3-209ENST00000561040 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 DSCC1Q9BVC3 393 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 NDUFB9Q9Y6M9 179 aa19.6■□□□□ 0.73
MEIS3-209ENST00000561040 RPS6KA4O75676 772 aa19.59■□□□□ 0.73
MEIS3-209ENST00000561040 ADORA1P30542 326 aa19.59■□□□□ 0.73
MEIS3-209ENST00000561040 TTF1Q15361 905 aaPredicted RBP19.59■□□□□ 0.73
MEIS3-209ENST00000561040 MPHOSPH8Q99549 860 aa19.59■□□□□ 0.73
MEIS3-209ENST00000561040 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
MEIS3-209ENST00000561040 UQCRFS1P1P0C7P4 283 aa19.58■□□□□ 0.73
MEIS3-209ENST00000561040 HSPA1LP34931 641 aa19.58■□□□□ 0.73
MEIS3-209ENST00000561040 IGHMBP2P38935 993 aaKnown RBP19.58■□□□□ 0.73
MEIS3-209ENST00000561040 LPIN2Q92539 896 aa19.58■□□□□ 0.73
MEIS3-209ENST00000561040 HCLS1P14317 486 aaPredicted RBP19.58■□□□□ 0.72
MEIS3-209ENST00000561040 FKBP4Q02790 459 aaKnown RBP eCLIP19.58■□□□□ 0.72
MEIS3-209ENST00000561040 ADCK5Q3MIX3 580 aa19.58■□□□□ 0.72
MEIS3-209ENST00000561040 ZSCAN25Q6NSZ9 544 aa19.58■□□□□ 0.72
MEIS3-209ENST00000561040 BLOC1S2Q6QNY1 142 aa19.58■□□□□ 0.72
MEIS3-209ENST00000561040 AKAP11Q9UKA4 1901 aa19.57■□□□□ 0.72
MEIS3-209ENST00000561040 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.72
MEIS3-209ENST00000561040 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
MEIS3-209ENST00000561040 CCNL1Q9UK58 526 aaPredicted RBP19.57■□□□□ 0.72
MEIS3-209ENST00000561040 COL24A1Q17RW2 1714 aa19.57■□□□□ 0.72
MEIS3-209ENST00000561040 TRAK2O60296 914 aa19.56■□□□□ 0.72
MEIS3-209ENST00000561040 SLC5A1P13866 664 aa19.56■□□□□ 0.72
MEIS3-209ENST00000561040 NOL8Q76FK4 1167 aaKnown RBP19.56■□□□□ 0.72
MEIS3-209ENST00000561040 CDC5LQ99459 802 aaKnown RBP19.56■□□□□ 0.72
MEIS3-209ENST00000561040 NYXQ9GZU5 481 aa19.56■□□□□ 0.72
MEIS3-209ENST00000561040 BAG4O95429 457 aaKnown RBP19.55■□□□□ 0.72
MEIS3-209ENST00000561040 FAM177BA6PVY3 158 aa19.55■□□□□ 0.72
MEIS3-209ENST00000561040 HMGB1P09429 215 aaKnown RBP19.55■□□□□ 0.72
MEIS3-209ENST00000561040 FGFR2P21802 821 aa19.55■□□□□ 0.72
MEIS3-209ENST00000561040 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
MEIS3-209ENST00000561040 CASZ1Q86V15 1759 aa19.55■□□□□ 0.72
MEIS3-209ENST00000561040 PDIA4P13667 645 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms