RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TBC1D16Q8TBP0 767 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 CSRNP1Q96S65 589 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 KCNQ5Q9NR82 932 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 PODXL2Q9NZ53 605 aa24.22■■□□□ 1.47
TPM1-226ENST00000560959 ZC3H12CQ9C0D7 883 aaKnown RBP24.21■■□□□ 1.47
TPM1-226ENST00000560959 FKBP1BP68106 108 aa24.2■■□□□ 1.46
TPM1-226ENST00000560959 DOK7Q18PE1 504 aa24.2■■□□□ 1.46
TPM1-226ENST00000560959 CHPF2Q9P2E5 772 aa24.2■■□□□ 1.46
TPM1-226ENST00000560959 DBF4Q9UBU7 674 aaPredicted RBP24.2■■□□□ 1.46
TPM1-226ENST00000560959 CTU1Q7Z7A3 348 aaKnown RBP24.19■■□□□ 1.46
TPM1-226ENST00000560959 ZNF609O15014 1411 aa24.18■■□□□ 1.46
TPM1-226ENST00000560959 TAF1P21675 1872 aa24.18■■□□□ 1.46
TPM1-226ENST00000560959 HSP90B1P14625 803 aaKnown RBP24.18■■□□□ 1.46
TPM1-226ENST00000560959 ZNF280AP59817 542 aaPredicted RBP24.18■■□□□ 1.46
TPM1-226ENST00000560959 HDGFL1Q5TGJ6 251 aa24.18■■□□□ 1.46
TPM1-226ENST00000560959 AGBL3Q8NEM8 1001 aa24.18■■□□□ 1.46
TPM1-226ENST00000560959 GGA3Q9NZ52 723 aa24.18■■□□□ 1.46
TPM1-226ENST00000560959 IRS4O14654 1257 aaPredicted RBP24.17■■□□□ 1.46
TPM1-226ENST00000560959 CDCA5Q96FF9 252 aa24.17■■□□□ 1.46
TPM1-226ENST00000560959 HYPKQ9NX55 129 aa24.17■■□□□ 1.46
TPM1-226ENST00000560959 ATP5J2-PTCD1G3V325 749 aa24.16■■□□□ 1.46
TPM1-226ENST00000560959 KRT24Q2M2I5 525 aa24.16■■□□□ 1.46
TPM1-226ENST00000560959 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
TPM1-226ENST00000560959 DDX60Q8IY21 1712 aaKnown RBP24.15■■□□□ 1.46
TPM1-226ENST00000560959 PKN2Q16513 984 aaKnown RBP24.15■■□□□ 1.46
TPM1-226ENST00000560959 PDE4DIPQ5VU43 2346 aa24.15■■□□□ 1.46
TPM1-226ENST00000560959 PITPNM2Q9BZ72 1349 aa24.14■■□□□ 1.46
TPM1-226ENST00000560959 G3V3G9 751 aa24.14■■□□□ 1.45
TPM1-226ENST00000560959 SOX10P56693 466 aa24.14■■□□□ 1.45
TPM1-226ENST00000560959 SCARF1Q14162 830 aa24.14■■□□□ 1.45
TPM1-226ENST00000560959 DCAF8Q5TAQ9 597 aa24.14■■□□□ 1.45
TPM1-226ENST00000560959 RSBN1LQ6PCB5 846 aaPredicted RBP24.14■■□□□ 1.45
TPM1-226ENST00000560959 ZBTB38Q8NAP3 1195 aaPredicted RBP24.14■■□□□ 1.45
TPM1-226ENST00000560959 RALBP1Q15311 655 aa24.13■■□□□ 1.45
TPM1-226ENST00000560959 RASAL3Q86YV0 1011 aa24.13■■□□□ 1.45
TPM1-226ENST00000560959 ZNF428Q96B54 188 aa24.13■■□□□ 1.45
TPM1-226ENST00000560959 ANKIB1Q9P2G1 1089 aa24.13■■□□□ 1.45
TPM1-226ENST00000560959 GGA1Q9UJY5 639 aa24.13■■□□□ 1.45
TPM1-226ENST00000560959 ANGEL2Q5VTE6 544 aaKnown RBP24.12■■□□□ 1.45
TPM1-226ENST00000560959 GMLQ99445 158 aa24.12■■□□□ 1.45
TPM1-226ENST00000560959 ASTN2O75129 1339 aaPredicted RBP24.11■■□□□ 1.45
TPM1-226ENST00000560959 UFL1O94874 794 aa24.11■■□□□ 1.45
TPM1-226ENST00000560959 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
TPM1-226ENST00000560959 PRPF38BQ5VTL8 546 aaKnown RBP24.11■■□□□ 1.45
TPM1-226ENST00000560959 TRIM35Q9UPQ4 493 aa24.11■■□□□ 1.45
TPM1-226ENST00000560959 AKAP11Q9UKA4 1901 aa24.1■■□□□ 1.45
TPM1-226ENST00000560959 USP17L8P0C7I0 530 aa24.1■■□□□ 1.45
TPM1-226ENST00000560959 PODNQ7Z5L7 613 aa24.1■■□□□ 1.45
TPM1-226ENST00000560959 LAS1LQ9Y4W2 734 aaKnown RBP24.1■■□□□ 1.45
TPM1-226ENST00000560959 NEUROD2Q15784 382 aa24.09■■□□□ 1.45
TPM1-226ENST00000560959 CCDC152Q4G0S7 254 aa24.09■■□□□ 1.45
TPM1-226ENST00000560959 NOM1Q5C9Z4 860 aaKnown RBP24.09■■□□□ 1.45
TPM1-226ENST00000560959 MYOZ2Q9NPC6 264 aa24.09■■□□□ 1.45
TPM1-226ENST00000560959 SEC31BQ9NQW1 1179 aa24.09■■□□□ 1.45
TPM1-226ENST00000560959 RUNDC1Q96C34 613 aa24.08■■□□□ 1.45
TPM1-226ENST00000560959 HPS5Q9UPZ3 1129 aa24.08■■□□□ 1.45
TPM1-226ENST00000560959 COL4A1P02462 1669 aa24.08■■□□□ 1.44
TPM1-226ENST00000560959 DUSP27Q5VZP5 1158 aa24.07■■□□□ 1.44
TPM1-226ENST00000560959 RIC3Q7Z5B4 369 aa24.07■■□□□ 1.44
TPM1-226ENST00000560959 CCDC191Q8NCU4 936 aa24.07■■□□□ 1.44
TPM1-226ENST00000560959 SCN9AQ15858 1988 aa24.07■■□□□ 1.44
TPM1-226ENST00000560959 USP17L3A6NCW0 530 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 USP17L4A6NCW7 530 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 PDE8AO60658 829 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 PCCAP05165 728 aaPredicted RBP24.06■■□□□ 1.44
TPM1-226ENST00000560959 ATP2B4P23634 1241 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 TM4SF4P48230 202 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 MMP14P50281 582 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 USP17L1Q7RTZ2 530 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 XDHP47989 1333 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 PAPPA2Q9BXP8 1791 aa24.06■■□□□ 1.44
TPM1-226ENST00000560959 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
TPM1-226ENST00000560959 HDAC9Q9UKV0 1011 aa24.05■■□□□ 1.44
TPM1-226ENST00000560959 ZNF296Q8WUU4 475 aaPredicted RBP24.04■■□□□ 1.44
TPM1-226ENST00000560959 ANKRD18AQ8IVF6 992 aa24.03■■□□□ 1.44
TPM1-226ENST00000560959 CCDC146Q8IYE0 955 aa24.03■■□□□ 1.44
TPM1-226ENST00000560959 CFHR5Q9BXR6 569 aa24.02■■□□□ 1.44
TPM1-226ENST00000560959 UBE2Q2LH0YL09 131 aa24.01■■□□□ 1.43
TPM1-226ENST00000560959 TBC1D8O95759 1140 aa24.01■■□□□ 1.43
TPM1-226ENST00000560959 CWC25Q9NXE8 425 aaPredicted RBP24.01■■□□□ 1.43
TPM1-226ENST00000560959 GPR25O00155 361 aa24■■□□□ 1.43
TPM1-226ENST00000560959 ZNF853P0CG23 659 aa24■■□□□ 1.43
TPM1-226ENST00000560959 MOB2Q70IA6 237 aa24■■□□□ 1.43
TPM1-226ENST00000560959 OGFOD1Q8N543 542 aa24■■□□□ 1.43
TPM1-226ENST00000560959 MYD88Q99836 296 aa24■■□□□ 1.43
TPM1-226ENST00000560959 CHMP4AQ9BY43 222 aa24■■□□□ 1.43
TPM1-226ENST00000560959 MBIPQ9NS73 344 aa24■■□□□ 1.43
TPM1-226ENST00000560959 NF2P35240 595 aa23.99■■□□□ 1.43
TPM1-226ENST00000560959 FBXO46Q6PJ61 603 aaPredicted RBP23.99■■□□□ 1.43
TPM1-226ENST00000560959 CDC5LQ99459 802 aaKnown RBP23.99■■□□□ 1.43
TPM1-226ENST00000560959 PHAXQ9H814 394 aaKnown RBP23.99■■□□□ 1.43
TPM1-226ENST00000560959 MYO3BQ8WXR4 1341 aa23.99■■□□□ 1.43
TPM1-226ENST00000560959 SREBF2Q12772 1141 aa23.98■■□□□ 1.43
TPM1-226ENST00000560959 NBPF9Q3BBW0 867 aa23.98■■□□□ 1.43
TPM1-226ENST00000560959 DACT2Q5SW24 774 aa23.98■■□□□ 1.43
TPM1-226ENST00000560959 METTL22Q9BUU2 404 aaPredicted RBP23.98■■□□□ 1.43
TPM1-226ENST00000560959 BSDC1Q9NW68 430 aaPredicted RBP23.98■■□□□ 1.43
TPM1-226ENST00000560959 MED23Q9ULK4 1368 aa23.98■■□□□ 1.43
TPM1-226ENST00000560959 PSME4Q14997 1843 aa23.98■■□□□ 1.43
TPM1-226ENST00000560959 WNT10BO00744 389 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms