RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 ZC3H12CQ9C0D7 883 aaKnown RBP25.4■■□□□ 1.66
IPO4-215ENST00000560935 DBNDD1Q9H9R9 158 aa25.4■■□□□ 1.66
IPO4-215ENST00000560935 BSDC1Q9NW68 430 aaPredicted RBP25.4■■□□□ 1.66
IPO4-215ENST00000560935 YDJCA8MPS7 323 aa25.39■■□□□ 1.66
IPO4-215ENST00000560935 ALDH1L1O75891 902 aa25.39■■□□□ 1.66
IPO4-215ENST00000560935 IGHMBP2P38935 993 aaKnown RBP25.39■■□□□ 1.66
IPO4-215ENST00000560935 EPS15P42566 896 aa25.39■■□□□ 1.66
IPO4-215ENST00000560935 SRCIN1Q9C0H9 1055 aa25.39■■□□□ 1.66
IPO4-215ENST00000560935 CSF1RP07333 972 aa25.38■■□□□ 1.65
IPO4-215ENST00000560935 ITGA6P23229 1130 aa25.38■■□□□ 1.65
IPO4-215ENST00000560935 FAM161AQ3B820 660 aa25.38■■□□□ 1.65
IPO4-215ENST00000560935 GPR101Q96P66 508 aaPredicted RBP25.38■■□□□ 1.65
IPO4-215ENST00000560935 BCL2L13Q9BXK5 485 aa25.38■■□□□ 1.65
IPO4-215ENST00000560935 GPRC5DQ9NZD1 345 aa25.38■■□□□ 1.65
IPO4-215ENST00000560935 PTPRCP08575 1304 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 G3V3G9 751 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 GRM8O00222 908 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 ECE2O60344 883 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 ATP2B4P23634 1241 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 GMPSP49915 693 aaPredicted RBP25.37■■□□□ 1.65
IPO4-215ENST00000560935 DCAF8Q5TAQ9 597 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 TRMT2AQ8IZ69 625 aaKnown RBP25.37■■□□□ 1.65
IPO4-215ENST00000560935 DNAJC5GQ8N7S2 189 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 SSH1Q8WYL5 1049 aa25.37■■□□□ 1.65
IPO4-215ENST00000560935 C9orf78Q9NZ63 289 aaPredicted RBP25.37■■□□□ 1.65
IPO4-215ENST00000560935 DOK7Q18PE1 504 aa25.36■■□□□ 1.65
IPO4-215ENST00000560935 USP50Q70EL3 339 aaPredicted RBP25.36■■□□□ 1.65
IPO4-215ENST00000560935 ADARB2Q9NS39 739 aaKnown RBP25.36■■□□□ 1.65
IPO4-215ENST00000560935 MINPP1Q9UNW1 487 aa25.36■■□□□ 1.65
IPO4-215ENST00000560935 ALDH1L2Q3SY69 923 aa25.35■■□□□ 1.65
IPO4-215ENST00000560935 MPHOSPH8Q99549 860 aa25.35■■□□□ 1.65
IPO4-215ENST00000560935 ANKRD18BA2A2Z9 1011 aa25.34■■□□□ 1.65
IPO4-215ENST00000560935 CT47B1P0C2W7 299 aaPredicted RBP25.34■■□□□ 1.65
IPO4-215ENST00000560935 MIER1Q8N108 512 aa25.34■■□□□ 1.65
IPO4-215ENST00000560935 KLRG1Q96E93 195 aa25.34■■□□□ 1.65
IPO4-215ENST00000560935 CHMP3Q9Y3E7 222 aa25.34■■□□□ 1.65
IPO4-215ENST00000560935 PASKQ96RG2 1323 aa25.34■■□□□ 1.65
IPO4-215ENST00000560935 PSMD14O00487 310 aa25.33■■□□□ 1.65
IPO4-215ENST00000560935 FOXO4P98177 505 aa25.33■■□□□ 1.65
IPO4-215ENST00000560935 MAP1SQ66K74 1059 aaPredicted RBP25.33■■□□□ 1.65
IPO4-215ENST00000560935 ITGBL1O95965 494 aaPredicted RBP25.32■■□□□ 1.64
IPO4-215ENST00000560935 CNTROBQ8N137 903 aa25.32■■□□□ 1.64
IPO4-215ENST00000560935 SMC4Q9NTJ3 1288 aa25.32■■□□□ 1.64
IPO4-215ENST00000560935 CCT4P50991 539 aaKnown RBP25.31■■□□□ 1.64
IPO4-215ENST00000560935 IFIT5Q13325 482 aaKnown RBP25.31■■□□□ 1.64
IPO4-215ENST00000560935 ANKRD2Q9GZV1 360 aa25.31■■□□□ 1.64
IPO4-215ENST00000560935 CREBZFQ9NS37 354 aa25.31■■□□□ 1.64
IPO4-215ENST00000560935 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
IPO4-215ENST00000560935 LMBR1LQ6UX01 489 aa25.3■■□□□ 1.64
IPO4-215ENST00000560935 DPF2Q92785 391 aa25.3■■□□□ 1.64
IPO4-215ENST00000560935 CNOT7Q9UIV1 285 aaKnown RBP25.3■■□□□ 1.64
IPO4-215ENST00000560935 ZBTB12Q9Y330 459 aaPredicted RBP25.3■■□□□ 1.64
IPO4-215ENST00000560935 SCN9AQ15858 1988 aa25.29■■□□□ 1.64
IPO4-215ENST00000560935 H7C1D1 291 aa25.29■■□□□ 1.64
IPO4-215ENST00000560935 RPS12P25398 132 aaKnown RBP25.29■■□□□ 1.64
IPO4-215ENST00000560935 KCNQ5Q9NR82 932 aa25.29■■□□□ 1.64
IPO4-215ENST00000560935 LEMD3Q9Y2U8 911 aa25.29■■□□□ 1.64
IPO4-215ENST00000560935 CCDC57Q2TAC2 916 aa25.28■■□□□ 1.64
IPO4-215ENST00000560935 EPHA10Q5JZY3 1008 aa25.28■■□□□ 1.64
IPO4-215ENST00000560935 MICALL2Q8IY33 904 aa25.28■■□□□ 1.64
IPO4-215ENST00000560935 PSME4Q14997 1843 aa25.28■■□□□ 1.64
IPO4-215ENST00000560935 TAF7LQ5H9L4 462 aa25.26■■□□□ 1.63
IPO4-215ENST00000560935 PODNQ7Z5L7 613 aa25.26■■□□□ 1.63
IPO4-215ENST00000560935 SUCLG2Q96I99 432 aa25.26■■□□□ 1.63
IPO4-215ENST00000560935 UTYO14607 1347 aa25.26■■□□□ 1.63
IPO4-215ENST00000560935 TMEM88BA6NKF7 163 aa25.25■■□□□ 1.63
IPO4-215ENST00000560935 VIL1P09327 827 aaKnown RBP25.25■■□□□ 1.63
IPO4-215ENST00000560935 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
IPO4-215ENST00000560935 KCNJ4P48050 445 aa25.25■■□□□ 1.63
IPO4-215ENST00000560935 CHRNDQ07001 517 aa25.25■■□□□ 1.63
IPO4-215ENST00000560935 ZNF804BA4D1E1 1349 aa25.25■■□□□ 1.63
IPO4-215ENST00000560935 SHTN1A0MZ66 631 aa25.24■■□□□ 1.63
IPO4-215ENST00000560935 WTIPA6NIX2 430 aaPredicted RBP25.24■■□□□ 1.63
IPO4-215ENST00000560935 TRPM4Q8TD43 1214 aa25.24■■□□□ 1.63
IPO4-215ENST00000560935 ZC3H15Q8WU90 426 aaKnown RBP25.24■■□□□ 1.63
IPO4-215ENST00000560935 JMYQ8N9B5 988 aa25.23■■□□□ 1.63
IPO4-215ENST00000560935 A0A1B0GUL6 1792 aa25.23■■□□□ 1.63
IPO4-215ENST00000560935 ZNF609O15014 1411 aa25.22■■□□□ 1.63
IPO4-215ENST00000560935 USP17L3A6NCW0 530 aa25.22■■□□□ 1.63
IPO4-215ENST00000560935 USP17L4A6NCW7 530 aa25.22■■□□□ 1.63
IPO4-215ENST00000560935 HIRAP54198 1017 aaPredicted RBP25.22■■□□□ 1.63
IPO4-215ENST00000560935 RSBN1LQ6PCB5 846 aaPredicted RBP25.22■■□□□ 1.63
IPO4-215ENST00000560935 USP17L1Q7RTZ2 530 aa25.22■■□□□ 1.63
IPO4-215ENST00000560935 COA1Q9GZY4 146 aa25.22■■□□□ 1.63
IPO4-215ENST00000560935 BRPF1P55201 1214 aaPredicted RBP25.21■■□□□ 1.63
IPO4-215ENST00000560935 HNRNPUQ00839 825 aaKnown RBP eCLIP25.21■■□□□ 1.63
IPO4-215ENST00000560935 LDHAL6AQ6ZMR3 332 aa25.21■■□□□ 1.63
IPO4-215ENST00000560935 AGBL3Q8NEM8 1001 aa25.21■■□□□ 1.63
IPO4-215ENST00000560935 KAZALD1Q96I82 304 aa25.21■■□□□ 1.63
IPO4-215ENST00000560935 ZNF594Q96JF6 807 aaPredicted RBP25.21■■□□□ 1.63
IPO4-215ENST00000560935 CNNM1Q9NRU3 951 aa25.21■■□□□ 1.63
IPO4-215ENST00000560935 PGAP2Q9UHJ9 254 aa25.21■■□□□ 1.63
IPO4-215ENST00000560935 TRPM7Q96QT4 1865 aa25.21■■□□□ 1.63
IPO4-215ENST00000560935 TBC1D10BQ4KMP7 808 aaPredicted RBP25.2■■□□□ 1.62
IPO4-215ENST00000560935 SAMD7Q7Z3H4 446 aa25.2■■□□□ 1.62
IPO4-215ENST00000560935 API5Q9BZZ5 524 aaKnown RBP25.2■■□□□ 1.62
IPO4-215ENST00000560935 BICC1Q9H694 974 aaKnown RBP25.2■■□□□ 1.62
IPO4-215ENST00000560935 MKRN1Q9UHC7 482 aaKnown RBP25.2■■□□□ 1.62
IPO4-215ENST00000560935 NOB1Q9ULX3 412 aaKnown RBP25.2■■□□□ 1.62
IPO4-215ENST00000560935 TAF5LO75529 589 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms