RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 CCDC93Q567U6 631 aa15.44■□□□□ 0.06
ALDH1A3-206ENST00000560555 EAPPQ56P03 285 aaPredicted RBP15.44■□□□□ 0.06
ALDH1A3-206ENST00000560555 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
ALDH1A3-206ENST00000560555 SUCLG2Q96I99 432 aa15.44■□□□□ 0.06
ALDH1A3-206ENST00000560555 TAOK3Q9H2K8 898 aa15.44■□□□□ 0.06
ALDH1A3-206ENST00000560555 TRIM27P14373 513 aa15.43■□□□□ 0.06
ALDH1A3-206ENST00000560555 FKBP4Q02790 459 aaKnown RBP eCLIP15.43■□□□□ 0.06
ALDH1A3-206ENST00000560555 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
ALDH1A3-206ENST00000560555 RTL9Q8NET4 1388 aa15.43■□□□□ 0.06
ALDH1A3-206ENST00000560555 CC2D2BQ6DHV5 1058 aa15.42■□□□□ 0.06
ALDH1A3-206ENST00000560555 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
ALDH1A3-206ENST00000560555 PSMD1Q99460 953 aa15.42■□□□□ 0.06
ALDH1A3-206ENST00000560555 RTFDC1Q9BY42 306 aaPredicted RBP15.42■□□□□ 0.06
ALDH1A3-206ENST00000560555 ZNF277Q9NRM2 450 aaPredicted RBP15.42■□□□□ 0.06
ALDH1A3-206ENST00000560555 SPEF2Q9C093 1822 aa15.42■□□□□ 0.06
ALDH1A3-206ENST00000560555 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
ALDH1A3-206ENST00000560555 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
ALDH1A3-206ENST00000560555 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
ALDH1A3-206ENST00000560555 BEGAINQ9BUH8 593 aa15.41■□□□□ 0.06
ALDH1A3-206ENST00000560555 ABT1Q9ULW3 272 aaKnown RBP15.41■□□□□ 0.06
ALDH1A3-206ENST00000560555 RLBP1P12271 317 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 GPSM2P81274 684 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 RABL6Q3YEC7 729 aaPredicted RBP15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 MAP1SQ66K74 1059 aaPredicted RBP15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 ATF7IPQ6VMQ6 1270 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 API5Q9BZZ5 524 aaKnown RBP15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 POLLQ9UGP5 575 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 HACL1Q9UJ83 578 aa15.4■□□□□ 0.06
ALDH1A3-206ENST00000560555 LMBR1LQ6UX01 489 aa15.39■□□□□ 0.05
ALDH1A3-206ENST00000560555 C9orf78Q9NZ63 289 aaPredicted RBP15.39■□□□□ 0.05
ALDH1A3-206ENST00000560555 ITGA6P23229 1130 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 EPHX2P34913 555 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 CAPNS2Q96L46 248 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 MCOLN1Q9GZU1 580 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 BICC1Q9H694 974 aaKnown RBP15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 TSKSQ9UJT2 592 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 MINPP1Q9UNW1 487 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 A0A1B0GUL6 1792 aa15.38■□□□□ 0.05
ALDH1A3-206ENST00000560555 FZD9O00144 591 aa15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 HSP90B1P14625 803 aaKnown RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 IARSP41252 1262 aaKnown RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 CCT4P50991 539 aaKnown RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 MPNDQ8N594 471 aa15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 CLUAP1Q96AJ1 413 aa15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 GPR101Q96P66 508 aaPredicted RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 MEIS3Q99687 375 aa15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 BSDC1Q9NW68 430 aaPredicted RBP15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 PODXL2Q9NZ53 605 aa15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
ALDH1A3-206ENST00000560555 ECE1P42892 770 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 RFX5P48382 616 aaPredicted RBP15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 TMC4Q7Z404 712 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 TMEM57Q8N5G2 664 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 TBC1D16Q8TBP0 767 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 ZNF541Q9H0D2 1346 aa15.36■□□□□ 0.05
ALDH1A3-206ENST00000560555 SCN9AQ15858 1988 aa15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 SNAP23O00161 211 aa15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 GRM1Q13255 1194 aa15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 ANKRD18AQ8IVF6 992 aa15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 PUS3Q9BZE2 481 aaKnown RBP15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 NSFL1CQ9UNZ2 370 aaKnown RBP15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 IRS2Q9Y4H2 1338 aa15.35■□□□□ 0.05
ALDH1A3-206ENST00000560555 YDJCA8MPS7 323 aa15.34■□□□□ 0.05
ALDH1A3-206ENST00000560555 IPO8O15397 1037 aaKnown RBP15.34■□□□□ 0.05
ALDH1A3-206ENST00000560555 AOC3Q16853 763 aa15.34■□□□□ 0.05
ALDH1A3-206ENST00000560555 DPP8Q6V1X1 898 aaPredicted RBP15.34■□□□□ 0.05
ALDH1A3-206ENST00000560555 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 PLIN1O60240 522 aa15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 CDC5LQ99459 802 aaKnown RBP15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 KCNQ5Q9NR82 932 aa15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 RIPOR2Q9Y4F9 1068 aa15.33■□□□□ 0.04
ALDH1A3-206ENST00000560555 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
ALDH1A3-206ENST00000560555 FMR1Q06787 632 aaKnown RBP eCLIP15.32■□□□□ 0.04
ALDH1A3-206ENST00000560555 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
ALDH1A3-206ENST00000560555 YTHDC1Q96MU7 727 aaKnown RBP15.32■□□□□ 0.04
ALDH1A3-206ENST00000560555 VPS33BQ9H267 617 aa15.32■□□□□ 0.04
ALDH1A3-206ENST00000560555 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 KLRK1P26718 216 aa15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 MAP2K2P36507 400 aa15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 CHRNDQ07001 517 aa15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 DGKZQ13574 1117 aa15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 PANK1Q8TE04 598 aa15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 LRRFIP2Q9Y608 721 aaKnown RBP15.31■□□□□ 0.04
ALDH1A3-206ENST00000560555 PPIP5K2O43314 1243 aa15.3■□□□□ 0.04
ALDH1A3-206ENST00000560555 CA12O43570 354 aa15.3■□□□□ 0.04
ALDH1A3-206ENST00000560555 AOC2O75106 756 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms