RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 VIL1P09327 827 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 GPSM2P81274 684 aa11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 ZNF428Q96B54 188 aa11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
RABGGTA-217ENST00000560521 CENPFP49454 3210 aa11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 SPEF2Q9C093 1822 aa11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 SCARF1Q14162 830 aa11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 ANGEL2Q5VTE6 544 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 FBXO46Q6PJ61 603 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 MOB2Q70IA6 237 aa11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 PLEKHF1Q96S99 279 aa11.82□□□□□ -0.52
RABGGTA-217ENST00000560521 GPR25O00155 361 aa11.81□□□□□ -0.52
RABGGTA-217ENST00000560521 TM4SF4P48230 202 aa11.81□□□□□ -0.52
RABGGTA-217ENST00000560521 FKBP1BP68106 108 aa11.81□□□□□ -0.52
RABGGTA-217ENST00000560521 TBC1D16Q8TBP0 767 aa11.81□□□□□ -0.52
RABGGTA-217ENST00000560521 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
RABGGTA-217ENST00000560521 UBE2Q2LH0YL09 131 aa11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 ZNF280AP59817 542 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 NOM1Q5C9Z4 860 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 EYA3Q99504 573 aa11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 R3HDMLQ9H3Y0 253 aa11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 SCAF8Q9UPN6 1271 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 MYH3P11055 1940 aa11.8□□□□□ -0.52
RABGGTA-217ENST00000560521 BRCA2P51587 3418 aa11.79□□□□□ -0.52
RABGGTA-217ENST00000560521 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
RABGGTA-217ENST00000560521 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
RABGGTA-217ENST00000560521 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
RABGGTA-217ENST00000560521 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
RABGGTA-217ENST00000560521 ZNF609O15014 1411 aa11.78□□□□□ -0.52
RABGGTA-217ENST00000560521 NEFMP07197 916 aa11.78□□□□□ -0.52
RABGGTA-217ENST00000560521 PRAMEF18Q5VWM3 479 aa11.78□□□□□ -0.52
RABGGTA-217ENST00000560521 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-217ENST00000560521 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
RABGGTA-217ENST00000560521 ZC3H12CQ9C0D7 883 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-217ENST00000560521 POTEFA5A3E0 1075 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 FKTNO75072 461 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 RPS8P62241 208 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 GMLQ99445 158 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 MYOZ2Q9NPC6 264 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 PODXL2Q9NZ53 605 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 HTTP42858 3142 aa11.77□□□□□ -0.53
RABGGTA-217ENST00000560521 FXR1P51114 621 aaKnown RBP eCLIP11.76□□□□□ -0.53
RABGGTA-217ENST00000560521 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
RABGGTA-217ENST00000560521 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 G3V3G9 751 aa11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
RABGGTA-217ENST00000560521 UFL1O94874 794 aa11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 PTPN12Q05209 780 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 ANKIB1Q9P2G1 1089 aa11.74□□□□□ -0.53
RABGGTA-217ENST00000560521 SZT2Q5T011 3432 aa11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 SREBF2Q12772 1141 aa11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 KRT24Q2M2I5 525 aa11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 GGA1Q9UJY5 639 aa11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 TRIM17Q9Y577 477 aa11.73□□□□□ -0.53
RABGGTA-217ENST00000560521 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 RIPK4P57078 832 aa11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
RABGGTA-217ENST00000560521 MAPK8IP3Q9UPT6 1336 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 OTOFQ9HC10 1997 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 WTIPA6NIX2 430 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 WNT10BO00744 389 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 EN2P19622 333 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 PRKG1Q13976 671 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 LDLRAD1Q5T700 205 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 SPRYD7Q5W111 196 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 PODNQ7Z5L7 613 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
RABGGTA-217ENST00000560521 CEP290O15078 2479 aa11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 NF2P35240 595 aa11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 PNNQ9H307 717 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 FZD1Q9UP38 647 aa11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 PTPN22Q9Y2R2 807 aa11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms