RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 WIPF1O43516 503 aa13.76□□□□□ -0.21
PDE8A-212ENST00000560333 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
PDE8A-212ENST00000560333 BPHLQ86WA6 291 aaPredicted RBP13.76□□□□□ -0.21
PDE8A-212ENST00000560333 ARMC2Q8NEN0 867 aa13.76□□□□□ -0.21
PDE8A-212ENST00000560333 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
PDE8A-212ENST00000560333 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
PDE8A-212ENST00000560333 SLIT3O75094 1523 aa13.75□□□□□ -0.21
PDE8A-212ENST00000560333 ANP32CO43423 234 aa13.75□□□□□ -0.21
PDE8A-212ENST00000560333 ADH1CP00326 375 aa13.75□□□□□ -0.21
PDE8A-212ENST00000560333 WDR4P57081 412 aaKnown RBP13.75□□□□□ -0.21
PDE8A-212ENST00000560333 HELBQ8NG08 1087 aaPredicted RBP13.75□□□□□ -0.21
PDE8A-212ENST00000560333 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
PDE8A-212ENST00000560333 C10orf71Q711Q0 1435 aa13.74□□□□□ -0.21
PDE8A-212ENST00000560333 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
PDE8A-212ENST00000560333 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
PDE8A-212ENST00000560333 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
PDE8A-212ENST00000560333 ZFP42Q96MM3 310 aa13.74□□□□□ -0.21
PDE8A-212ENST00000560333 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
PDE8A-212ENST00000560333 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
PDE8A-212ENST00000560333 LY75O60449 1722 aa13.73□□□□□ -0.21
PDE8A-212ENST00000560333 LBX1P52954 281 aa13.73□□□□□ -0.21
PDE8A-212ENST00000560333 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
PDE8A-212ENST00000560333 POLR3EQ9NVU0 708 aa13.73□□□□□ -0.21
PDE8A-212ENST00000560333 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
PDE8A-212ENST00000560333 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
PDE8A-212ENST00000560333 KTN1Q86UP2 1357 aaKnown RBP13.72□□□□□ -0.21
PDE8A-212ENST00000560333 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
PDE8A-212ENST00000560333 FYB1O15117 783 aa13.72□□□□□ -0.21
PDE8A-212ENST00000560333 TIMP2P16035 220 aa13.72□□□□□ -0.21
PDE8A-212ENST00000560333 INSM1Q01101 510 aaPredicted RBP13.72□□□□□ -0.21
PDE8A-212ENST00000560333 NR5A1Q13285 461 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 SCARF1Q14162 830 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 RALBP1Q15311 655 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 C4orf48Q5BLP8 95 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 CC2D1BQ5T0F9 858 aaKnown RBP13.71□□□□□ -0.21
PDE8A-212ENST00000560333 MRPL14Q6P1L8 145 aaKnown RBP13.71□□□□□ -0.21
PDE8A-212ENST00000560333 SMIM5Q71RC9 77 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
PDE8A-212ENST00000560333 KLF16Q9BXK1 252 aaPredicted RBP13.71□□□□□ -0.21
PDE8A-212ENST00000560333 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 USP54Q70EL1 1684 aa13.71□□□□□ -0.21
PDE8A-212ENST00000560333 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.22
PDE8A-212ENST00000560333 DOT1LQ8TEK3 1739 aa13.7□□□□□ -0.22
PDE8A-212ENST00000560333 RNF181Q9P0P0 153 aa13.7□□□□□ -0.22
PDE8A-212ENST00000560333 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
PDE8A-212ENST00000560333 RGS19P49795 217 aa13.69□□□□□ -0.22
PDE8A-212ENST00000560333 LCE2CQ5TA81 110 aa13.69□□□□□ -0.22
PDE8A-212ENST00000560333 NSD2O96028 1365 aa13.69□□□□□ -0.22
PDE8A-212ENST00000560333 C5P01031 1676 aa13.69□□□□□ -0.22
PDE8A-212ENST00000560333 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
PDE8A-212ENST00000560333 IL2RBP14784 551 aa13.68□□□□□ -0.22
PDE8A-212ENST00000560333 GRM5P41594 1212 aa13.68□□□□□ -0.22
PDE8A-212ENST00000560333 NPAS3Q8IXF0 933 aa13.68□□□□□ -0.22
PDE8A-212ENST00000560333 DDX54Q8TDD1 881 aaKnown RBP13.68□□□□□ -0.22
PDE8A-212ENST00000560333 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
PDE8A-212ENST00000560333 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
PDE8A-212ENST00000560333 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
PDE8A-212ENST00000560333 MYBBP1AQ9BQG0 1328 aaKnown RBP13.66□□□□□ -0.22
PDE8A-212ENST00000560333 ZIC2O95409 532 aaPredicted RBP13.66□□□□□ -0.22
PDE8A-212ENST00000560333 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
PDE8A-212ENST00000560333 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
PDE8A-212ENST00000560333 PURBQ96QR8 312 aaKnown RBP13.66□□□□□ -0.22
PDE8A-212ENST00000560333 STK17AQ9UEE5 414 aa13.66□□□□□ -0.22
PDE8A-212ENST00000560333 A0A0G2JLW4 131 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 NME9Q86XW9 330 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
PDE8A-212ENST00000560333 SH3RF1Q7Z6J0 888 aa13.64□□□□□ -0.23
PDE8A-212ENST00000560333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.23
PDE8A-212ENST00000560333 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
PDE8A-212ENST00000560333 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
PDE8A-212ENST00000560333 NR3C2P08235 984 aa13.63□□□□□ -0.23
PDE8A-212ENST00000560333 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
PDE8A-212ENST00000560333 SH3BP5LQ7L8J4 393 aa13.63□□□□□ -0.23
PDE8A-212ENST00000560333 AMIGO3Q86WK7 504 aa13.63□□□□□ -0.23
PDE8A-212ENST00000560333 ITPKCQ96DU7 683 aa13.63□□□□□ -0.23
PDE8A-212ENST00000560333 C1QTNF2Q9BXJ5 285 aa13.63□□□□□ -0.23
PDE8A-212ENST00000560333 TOGARAM1Q9Y4F4 1720 aa13.63□□□□□ -0.23
PDE8A-212ENST00000560333 CNTNAP1P78357 1384 aa13.62□□□□□ -0.23
PDE8A-212ENST00000560333 CTDSPL2Q05D32 466 aa13.62□□□□□ -0.23
PDE8A-212ENST00000560333 IRF7Q92985 503 aa13.62□□□□□ -0.23
PDE8A-212ENST00000560333 SKIV2LQ15477 1246 aaKnown RBP13.61□□□□□ -0.23
PDE8A-212ENST00000560333 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
PDE8A-212ENST00000560333 GPKOWQ92917 476 aaPredicted RBP eCLIP13.61□□□□□ -0.23
PDE8A-212ENST00000560333 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
PDE8A-212ENST00000560333 DPEP1P16444 411 aa13.6□□□□□ -0.23
PDE8A-212ENST00000560333 FBLN1P23142 703 aa13.6□□□□□ -0.23
PDE8A-212ENST00000560333 VEGFBP49765 207 aa13.6□□□□□ -0.23
PDE8A-212ENST00000560333 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
PDE8A-212ENST00000560333 MAP4K5Q9Y4K4 846 aa13.6□□□□□ -0.23
PDE8A-212ENST00000560333 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
PDE8A-212ENST00000560333 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
PDE8A-212ENST00000560333 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
PDE8A-212ENST00000560333 VASH1Q7L8A9 365 aaPredicted RBP13.59□□□□□ -0.23
PDE8A-212ENST00000560333 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
PDE8A-212ENST00000560333 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
PDE8A-212ENST00000560333 KIF13BQ9NQT8 1826 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms