RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NBPF7P0C2Y1 421 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-213ENST00000560175 FAM161AQ3B820 660 aa16.73■□□□□ 0.27
SMAD3-213ENST00000560175 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
SMAD3-213ENST00000560175 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
SMAD3-213ENST00000560175 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-213ENST00000560175 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
SMAD3-213ENST00000560175 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 EPHX2P34913 555 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 APLP1P51693 650 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 CIAPIN1Q6FI81 312 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 ARHGAP45Q92619 1136 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 PSME4Q14997 1843 aa16.72■□□□□ 0.27
SMAD3-213ENST00000560175 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
SMAD3-213ENST00000560175 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.277e-6■□□□□ 8.2
SMAD3-213ENST00000560175 TNIP1Q15025 636 aa16.71■□□□□ 0.27
SMAD3-213ENST00000560175 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-213ENST00000560175 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
SMAD3-213ENST00000560175 LMBR1LQ6UX01 489 aa16.71■□□□□ 0.27
SMAD3-213ENST00000560175 PNMA8AQ86V59 439 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-213ENST00000560175 LDHDQ86WU2 507 aa16.71■□□□□ 0.27
SMAD3-213ENST00000560175 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
SMAD3-213ENST00000560175 GJA3Q9Y6H8 435 aa16.71■□□□□ 0.27
SMAD3-213ENST00000560175 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
SMAD3-213ENST00000560175 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
SMAD3-213ENST00000560175 UFL1O94874 794 aa16.7■□□□□ 0.26
SMAD3-213ENST00000560175 GPRC5DQ9NZD1 345 aa16.7■□□□□ 0.26
SMAD3-213ENST00000560175 NOB1Q9ULX3 412 aaKnown RBP16.7■□□□□ 0.26
SMAD3-213ENST00000560175 LEMD3Q9Y2U8 911 aa16.7■□□□□ 0.26
SMAD3-213ENST00000560175 A0A1B0GUL6 1792 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 RIMBP2O15034 1052 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 EPS15P42566 896 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
SMAD3-213ENST00000560175 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
SMAD3-213ENST00000560175 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 DPF2Q92785 391 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 SUCLG2Q96I99 432 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 GPR101Q96P66 508 aaPredicted RBP16.69■□□□□ 0.26
SMAD3-213ENST00000560175 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 ZBED9Q6R2W3 1325 aa16.69■□□□□ 0.26
SMAD3-213ENST00000560175 MED23Q9ULK4 1368 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 ECE2O60344 883 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 RAD17O75943 681 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 ITGBL1O95965 494 aaPredicted RBP16.68■□□□□ 0.26
SMAD3-213ENST00000560175 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
SMAD3-213ENST00000560175 USP50Q70EL3 339 aaPredicted RBP16.68■□□□□ 0.26
SMAD3-213ENST00000560175 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
SMAD3-213ENST00000560175 KCNQ5Q9NR82 932 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 ZNF609O15014 1411 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 IRS2Q9Y4H2 1338 aa16.68■□□□□ 0.26
SMAD3-213ENST00000560175 PSMD14O00487 310 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 LMOD1P29536 600 aaPredicted RBP16.67■□□□□ 0.26
SMAD3-213ENST00000560175 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 CCDC57Q2TAC2 916 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 C15orf52Q6ZUT6 534 aaKnown RBP16.67■□□□□ 0.26
SMAD3-213ENST00000560175 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 PASKQ96RG2 1323 aa16.67■□□□□ 0.26
SMAD3-213ENST00000560175 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
SMAD3-213ENST00000560175 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
SMAD3-213ENST00000560175 CHRNDQ07001 517 aa16.66■□□□□ 0.26
SMAD3-213ENST00000560175 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
SMAD3-213ENST00000560175 ADARB2Q9NS39 739 aaKnown RBP16.66■□□□□ 0.26
SMAD3-213ENST00000560175 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
SMAD3-213ENST00000560175 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
SMAD3-213ENST00000560175 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
SMAD3-213ENST00000560175 ZNF804BA4D1E1 1349 aa16.65■□□□□ 0.26
SMAD3-213ENST00000560175 EAPPQ56P03 285 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-213ENST00000560175 LDHAL6AQ6ZMR3 332 aa16.64■□□□□ 0.25
SMAD3-213ENST00000560175 TXNRD3Q86VQ6 643 aa16.64■□□□□ 0.25
SMAD3-213ENST00000560175 ZNF594Q96JF6 807 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-213ENST00000560175 GMLQ99445 158 aa16.64■□□□□ 0.25
SMAD3-213ENST00000560175 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.25
SMAD3-213ENST00000560175 RIPOR2Q9Y4F9 1068 aa16.64■□□□□ 0.25
SMAD3-213ENST00000560175 BCAR3O75815 825 aa16.63■□□□□ 0.25
SMAD3-213ENST00000560175 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
SMAD3-213ENST00000560175 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
SMAD3-213ENST00000560175 ZC3H15Q8WU90 426 aaKnown RBP16.63■□□□□ 0.25
SMAD3-213ENST00000560175 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
SMAD3-213ENST00000560175 ZBTB12Q9Y330 459 aaPredicted RBP16.63■□□□□ 0.25
SMAD3-213ENST00000560175 CHMP3Q9Y3E7 222 aa16.63■□□□□ 0.25
SMAD3-213ENST00000560175 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
SMAD3-213ENST00000560175 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
SMAD3-213ENST00000560175 H7C1D1 291 aa16.61■□□□□ 0.25
SMAD3-213ENST00000560175 TAF5LO75529 589 aa16.61■□□□□ 0.25
SMAD3-213ENST00000560175 TRIM27P14373 513 aa16.61■□□□□ 0.25
SMAD3-213ENST00000560175 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-213ENST00000560175 RSBN1LQ6PCB5 846 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-213ENST00000560175 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
SMAD3-213ENST00000560175 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
SMAD3-213ENST00000560175 POLR2AP24928 1970 aaKnown RBP16.6■□□□□ 0.25
SMAD3-213ENST00000560175 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms