RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 PLEKHF1Q96S99 279 aa16.9■□□□□ 0.3
RABGGTA-213ENST00000560127 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
RABGGTA-213ENST00000560127 GPSM2P81274 684 aa16.89■□□□□ 0.29
RABGGTA-213ENST00000560127 NEFMP07197 916 aa16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 AIMP1Q12904 312 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 ZNF296Q8WUU4 475 aaPredicted RBP16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 BRCA2P51587 3418 aa16.88■□□□□ 0.29
RABGGTA-213ENST00000560127 TBC1D8O95759 1140 aa16.87■□□□□ 0.29
RABGGTA-213ENST00000560127 HDAC9Q9UKV0 1011 aa16.87■□□□□ 0.29
RABGGTA-213ENST00000560127 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-213ENST00000560127 ANGEL2Q5VTE6 544 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-213ENST00000560127 MOB2Q70IA6 237 aa16.86■□□□□ 0.29
RABGGTA-213ENST00000560127 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
RABGGTA-213ENST00000560127 EYA3Q99504 573 aa16.86■□□□□ 0.29
RABGGTA-213ENST00000560127 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-213ENST00000560127 FKBP1BP68106 108 aa16.85■□□□□ 0.29
RABGGTA-213ENST00000560127 SCARF1Q14162 830 aa16.85■□□□□ 0.29
RABGGTA-213ENST00000560127 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
RABGGTA-213ENST00000560127 FBXO46Q6PJ61 603 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-213ENST00000560127 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
RABGGTA-213ENST00000560127 ZNF609O15014 1411 aa16.84■□□□□ 0.29
RABGGTA-213ENST00000560127 GPR25O00155 361 aa16.83■□□□□ 0.28
RABGGTA-213ENST00000560127 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
RABGGTA-213ENST00000560127 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-213ENST00000560127 TRIOBPQ9H2D6 2365 aa16.83■□□□□ 0.28
RABGGTA-213ENST00000560127 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-213ENST00000560127 ZNF646O15015 1829 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 TM4SF4P48230 202 aa16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 RSBN1LQ6PCB5 846 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 ISCA1Q9BUE6 129 aa16.82■□□□□ 0.28
RABGGTA-213ENST00000560127 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
RABGGTA-213ENST00000560127 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-213ENST00000560127 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-213ENST00000560127 AGBL3Q8NEM8 1001 aa16.81■□□□□ 0.28
RABGGTA-213ENST00000560127 GMLQ99445 158 aa16.81■□□□□ 0.28
RABGGTA-213ENST00000560127 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
RABGGTA-213ENST00000560127 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
RABGGTA-213ENST00000560127 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
RABGGTA-213ENST00000560127 R3HDMLQ9H3Y0 253 aa16.8■□□□□ 0.28
RABGGTA-213ENST00000560127 MYOZ2Q9NPC6 264 aa16.8■□□□□ 0.28
RABGGTA-213ENST00000560127 BABAM1Q9NWV8 329 aa16.8■□□□□ 0.28
RABGGTA-213ENST00000560127 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
RABGGTA-213ENST00000560127 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
RABGGTA-213ENST00000560127 UFL1O94874 794 aa16.79■□□□□ 0.28
RABGGTA-213ENST00000560127 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-213ENST00000560127 PLBD2Q8NHP8 589 aa16.79■□□□□ 0.28
RABGGTA-213ENST00000560127 G3V3G9 751 aa16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 USP17L8P0C7I0 530 aa16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 CFHR5Q9BXR6 569 aa16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 CHPF2Q9P2E5 772 aa16.78■□□□□ 0.28
RABGGTA-213ENST00000560127 LAMB1P07942 1786 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 FKTNO75072 461 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 RIPK4P57078 832 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 ANKRD13DQ6ZTN6 518 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 SEC31BQ9NQW1 1179 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 ANKIB1Q9P2G1 1089 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
RABGGTA-213ENST00000560127 SPEF2Q9C093 1822 aa16.77■□□□□ 0.27
RABGGTA-213ENST00000560127 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
RABGGTA-213ENST00000560127 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-213ENST00000560127 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
RABGGTA-213ENST00000560127 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-213ENST00000560127 MYH3P11055 1940 aa16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
RABGGTA-213ENST00000560127 CHL1O00533 1208 aa16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 MXD3Q9BW11 206 aa16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-213ENST00000560127 WNT10BO00744 389 aa16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 NF2P35240 595 aa16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 OTOP1Q7RTM1 612 aa16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 ZBTB38Q8NAP3 1195 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 TRIM17Q9Y577 477 aa16.71■□□□□ 0.27
RABGGTA-213ENST00000560127 XDHP47989 1333 aa16.7■□□□□ 0.26
RABGGTA-213ENST00000560127 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
RABGGTA-213ENST00000560127 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-213ENST00000560127 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
RABGGTA-213ENST00000560127 PRKG1Q13976 671 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms