RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 GTF3C6Q969F1 213 aa19.29■□□□□ 0.68
APH1B-207ENST00000559971 DHX32Q7L7V1 743 aaKnown RBP19.28■□□□□ 0.68
APH1B-207ENST00000559971 FBXL16Q8N461 479 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 ZBTB38Q8NAP3 1195 aaPredicted RBP19.28■□□□□ 0.68
APH1B-207ENST00000559971 LTBP4Q8N2S1 1624 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 FIBPO43427 364 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 ST3GAL1Q11201 340 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 JARID2Q92833 1246 aaPredicted RBP19.28■□□□□ 0.68
APH1B-207ENST00000559971 ZBTB3Q9H5J0 574 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 GDPD2Q9HCC8 539 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 ABCA3Q99758 1704 aa19.28■□□□□ 0.68
APH1B-207ENST00000559971 ZNF500O60304 480 aaPredicted RBP19.27■□□□□ 0.67
APH1B-207ENST00000559971 CSF1RP07333 972 aa19.27■□□□□ 0.67
APH1B-207ENST00000559971 TERF1P54274 439 aa19.27■□□□□ 0.67
APH1B-207ENST00000559971 FGD1P98174 961 aa19.27■□□□□ 0.67
APH1B-207ENST00000559971 DNM1Q05193 864 aaKnown RBP19.27■□□□□ 0.67
APH1B-207ENST00000559971 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.67
APH1B-207ENST00000559971 NECAB1Q8N987 351 aa19.27■□□□□ 0.67
APH1B-207ENST00000559971 RGS22Q8NE09 1264 aa19.27■□□□□ 0.67
APH1B-207ENST00000559971 A0A1B0GUL7 405 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 GOLGA6L4A6NEF3 574 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 GOLIM4O00461 696 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 PFKFB2O60825 505 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 TAF7LQ5H9L4 462 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 GORABQ5T7V8 394 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 DDX46Q7L014 1031 aaKnown RBP19.26■□□□□ 0.67
APH1B-207ENST00000559971 CHAMP1Q96JM3 812 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 LARP6Q9BRS8 491 aaKnown RBP19.26■□□□□ 0.67
APH1B-207ENST00000559971 AGXT2Q9BYV1 514 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 CFAP45Q9UL16 551 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 TJP1Q07157 1748 aa19.26■□□□□ 0.67
APH1B-207ENST00000559971 CYP21A2P08686 494 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 IFIT5Q13325 482 aaKnown RBP19.25■□□□□ 0.67
APH1B-207ENST00000559971 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
APH1B-207ENST00000559971 Q6ZUG5 572 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
APH1B-207ENST00000559971 ZNF512BQ96KM6 892 aaPredicted RBP19.25■□□□□ 0.67
APH1B-207ENST00000559971 AK7Q96M32 723 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 STRN4Q9NRL3 753 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 DDX19AQ9NUU7 478 aaKnown RBP19.25■□□□□ 0.67
APH1B-207ENST00000559971 ZKSCAN5Q9Y2L8 839 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
APH1B-207ENST00000559971 TPM3P06753 285 aa19.24■□□□□ 0.67
APH1B-207ENST00000559971 CCDC192P0DO97 292 aa19.24■□□□□ 0.67
APH1B-207ENST00000559971 HSP90B1P14625 803 aaKnown RBP19.24■□□□□ 0.67
APH1B-207ENST00000559971 FOXD4L6Q3SYB3 417 aaPredicted RBP19.24■□□□□ 0.67
APH1B-207ENST00000559971 TTC39AQ5SRH9 613 aa19.24■□□□□ 0.67
APH1B-207ENST00000559971 NAA16Q6N069 864 aaPredicted RBP19.24■□□□□ 0.67
APH1B-207ENST00000559971 FOXD4L3Q6VB84 417 aaPredicted RBP19.24■□□□□ 0.67
APH1B-207ENST00000559971 ZNF274Q96GC6 653 aaPredicted RBP19.24■□□□□ 0.67
APH1B-207ENST00000559971 LRP6O75581 1613 aa19.24■□□□□ 0.67
APH1B-207ENST00000559971 SMARCC2Q8TAQ2 1214 aa19.23■□□□□ 0.67
APH1B-207ENST00000559971 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
APH1B-207ENST00000559971 SHANK3Q9BYB0 1731 aa19.23■□□□□ 0.67
APH1B-207ENST00000559971 ERVV-1B6SEH8 477 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 H3BQV1 296 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 CAVIN2O95810 425 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 TPM2P07951 284 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 TIMM10P62072 90 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 IFFO2Q5TF58 517 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.22■□□□□ 0.67
APH1B-207ENST00000559971 HSPD1P10809 573 aaKnown RBP19.22■□□□□ 0.67
APH1B-207ENST00000559971 EXOSC10Q01780 885 aaKnown RBP19.22■□□□□ 0.67
APH1B-207ENST00000559971 TTF1Q15361 905 aaPredicted RBP19.22■□□□□ 0.67
APH1B-207ENST00000559971 LRRC24Q50LG9 513 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 SPATA32Q96LK8 384 aa19.22■□□□□ 0.67
APH1B-207ENST00000559971 NAP1L5Q96NT1 182 aaPredicted RBP19.22■□□□□ 0.67
APH1B-207ENST00000559971 WDR19Q8NEZ3 1342 aa19.21■□□□□ 0.67
APH1B-207ENST00000559971 DHX16O60231 1041 aaKnown RBP19.21■□□□□ 0.67
APH1B-207ENST00000559971 OFD1O75665 1012 aa19.21■□□□□ 0.67
APH1B-207ENST00000559971 PTMAP06454 111 aaKnown RBP19.21■□□□□ 0.67
APH1B-207ENST00000559971 CDC37L1Q7L3B6 337 aa19.21■□□□□ 0.67
APH1B-207ENST00000559971 PIGBQ92521 554 aa19.21■□□□□ 0.67
APH1B-207ENST00000559971 MAP3K11Q16584 847 aa19.2■□□□□ 0.66
APH1B-207ENST00000559971 IMMTQ16891 758 aaKnown RBP19.2■□□□□ 0.66
APH1B-207ENST00000559971 RNF214Q8ND24 703 aa19.2■□□□□ 0.66
APH1B-207ENST00000559971 APPBP2Q92624 585 aa19.2■□□□□ 0.66
APH1B-207ENST00000559971 FUCA2Q9BTY2 467 aa19.2■□□□□ 0.66
APH1B-207ENST00000559971 NUP62CLQ9H1M0 184 aa19.2■□□□□ 0.66
APH1B-207ENST00000559971 ANKRD18BA2A2Z9 1011 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 EVCP57679 992 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 CCDC129Q6ZRS4 1044 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 DNAJC10Q8IXB1 793 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 BRF1Q92994 677 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 XAGE2Q96GT9 111 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 ZNF396Q96N95 335 aaPredicted RBP19.19■□□□□ 0.66
APH1B-207ENST00000559971 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
APH1B-207ENST00000559971 MAST3O60307 1309 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 DISP2A7MBM2 1401 aa19.19■□□□□ 0.66
APH1B-207ENST00000559971 E7EWF7 191 aa19.18■□□□□ 0.66
APH1B-207ENST00000559971 RESTQ13127 1097 aa19.18■□□□□ 0.66
APH1B-207ENST00000559971 TTC6Q86TZ1 520 aa19.18■□□□□ 0.66
APH1B-207ENST00000559971 COL14A1Q05707 1796 aaKnown RBP19.18■□□□□ 0.66
APH1B-207ENST00000559971 TCHHQ07283 1943 aa19.17■□□□□ 0.66
APH1B-207ENST00000559971 BCL9O00512 1426 aa19.17■□□□□ 0.66
APH1B-207ENST00000559971 CTAGE5O15320 804 aa19.17■□□□□ 0.66
APH1B-207ENST00000559971 KDM4AO75164 1064 aa19.17■□□□□ 0.66
APH1B-207ENST00000559971 UQCRFS1P1P0C7P4 283 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms