RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 RAD17O75943 681 aa18.77■□□□□ 0.6
RABGGTA-211ENST00000559850 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
RABGGTA-211ENST00000559850 GPC2Q8N158 579 aa18.77■□□□□ 0.6
RABGGTA-211ENST00000559850 L3MBTL3Q96JM7 780 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-211ENST00000559850 SCN9AQ15858 1988 aa18.77■□□□□ 0.59
RABGGTA-211ENST00000559850 IGHMBP2P38935 993 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-211ENST00000559850 CXCL9Q07325 125 aa18.76■□□□□ 0.59
RABGGTA-211ENST00000559850 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
RABGGTA-211ENST00000559850 VPS33BQ9H267 617 aa18.76■□□□□ 0.59
RABGGTA-211ENST00000559850 GGA1Q9UJY5 639 aa18.76■□□□□ 0.59
RABGGTA-211ENST00000559850 MINPP1Q9UNW1 487 aa18.76■□□□□ 0.59
RABGGTA-211ENST00000559850 ANKRD18BA2A2Z9 1011 aa18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 BCAR3O75815 825 aa18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 ZNF594Q96JF6 807 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 TAF1DQ9H5J8 278 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 BSDC1Q9NW68 430 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 PODXL2Q9NZ53 605 aa18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
RABGGTA-211ENST00000559850 XDHP47989 1333 aa18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 ZBED9Q6R2W3 1325 aa18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 HSPA6P17066 643 aa18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 EYA3Q99504 573 aa18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 HACL1Q9UJ83 578 aa18.74■□□□□ 0.59
RABGGTA-211ENST00000559850 ADAMTSL1Q8N6G6 1762 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 IQCA1LA6NCM1 817 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 ECE2O60344 883 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 EPHX2P34913 555 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 SCNN1DP51172 638 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 SMC1BQ8NDV3 1235 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 ZC3H12CQ9C0D7 883 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 UTYO14607 1347 aa18.73■□□□□ 0.59
RABGGTA-211ENST00000559850 PSME4Q14997 1843 aa18.72■□□□□ 0.59
RABGGTA-211ENST00000559850 EPS15P42566 896 aa18.72■□□□□ 0.59
RABGGTA-211ENST00000559850 CIAPIN1Q6FI81 312 aa18.72■□□□□ 0.59
RABGGTA-211ENST00000559850 USP44Q9H0E7 712 aa18.72■□□□□ 0.59
RABGGTA-211ENST00000559850 BICC1Q9H694 974 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-211ENST00000559850 ATP2B4P23634 1241 aa18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 GMPSP49915 693 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 BRPF1P55201 1214 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 HTRA3P83110 453 aa18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 FSTL1Q12841 308 aa18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 HELBQ8NG08 1087 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 FRAT1Q92837 279 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 API5Q9BZZ5 524 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-211ENST00000559850 SHTN1A0MZ66 631 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 G3V3G9 751 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 SNAP23O00161 211 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 TAF5LO75529 589 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 KLRK1P26718 216 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 CCT4P50991 539 aaKnown RBP18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 CHRNDQ07001 517 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 DCAF8Q5TAQ9 597 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 KIF16BQ96L93 1317 aa18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 ZNF646O15015 1829 aaPredicted RBP18.7■□□□□ 0.58
RABGGTA-211ENST00000559850 PSMD14O00487 310 aa18.69■□□□□ 0.58
RABGGTA-211ENST00000559850 CHADLQ6NUI6 762 aa18.69■□□□□ 0.58
RABGGTA-211ENST00000559850 PLIN1O60240 522 aa18.68■□□□□ 0.58
RABGGTA-211ENST00000559850 TNIP1Q15025 636 aa18.68■□□□□ 0.58
RABGGTA-211ENST00000559850 TXNRD3Q86VQ6 643 aa18.68■□□□□ 0.58
RABGGTA-211ENST00000559850 PUS3Q9BZE2 481 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-211ENST00000559850 GPRC5DQ9NZD1 345 aa18.68■□□□□ 0.58
RABGGTA-211ENST00000559850 ZNF804BA4D1E1 1349 aa18.68■□□□□ 0.58
RABGGTA-211ENST00000559850 LDHAL6AQ6ZMR3 332 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 LDHDQ86WU2 507 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 KLHDC4Q8TBB5 520 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 ANKRD2Q9GZV1 360 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 CNNM1Q9NRU3 951 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 MED23Q9ULK4 1368 aa18.67■□□□□ 0.58
RABGGTA-211ENST00000559850 TRIM27P14373 513 aa18.66■□□□□ 0.58
RABGGTA-211ENST00000559850 KCNJ4P48050 445 aa18.66■□□□□ 0.58
RABGGTA-211ENST00000559850 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-211ENST00000559850 LEMD3Q9Y2U8 911 aa18.66■□□□□ 0.58
RABGGTA-211ENST00000559850 MAP1SQ66K74 1059 aaPredicted RBP18.65■□□□□ 0.58
RABGGTA-211ENST00000559850 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
RABGGTA-211ENST00000559850 MEIS3Q99687 375 aa18.65■□□□□ 0.58
RABGGTA-211ENST00000559850 UBTFL1P0CB47 393 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-211ENST00000559850 APLP1P51693 650 aa18.64■□□□□ 0.57
RABGGTA-211ENST00000559850 PNMA8AQ86V59 439 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-211ENST00000559850 CNOT7Q9UIV1 285 aaKnown RBP18.64■□□□□ 0.57
RABGGTA-211ENST00000559850 IPO8O15397 1037 aaKnown RBP18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 LRRC24Q50LG9 513 aa18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 TRPM4Q8TD43 1214 aa18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 FBXW7Q969H0 707 aa18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 MXD3Q9BW11 206 aa18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 ADARB2Q9NS39 739 aaKnown RBP18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
RABGGTA-211ENST00000559850 INTS3Q68E01 1043 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms