RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
TRAF3-207ENST00000559734 EYA3Q99504 573 aa14.17□□□□□ -0.14
TRAF3-207ENST00000559734 POLLQ9UGP5 575 aa14.17□□□□□ -0.14
TRAF3-207ENST00000559734 TNRC18O15417 2968 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-207ENST00000559734 AKAP11Q9UKA4 1901 aa14.17□□□□□ -0.14
TRAF3-207ENST00000559734 LRRC37AA6NMS7 1700 aa14.16□□□□□ -0.14
TRAF3-207ENST00000559734 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
TRAF3-207ENST00000559734 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
TRAF3-207ENST00000559734 ANGEL2Q5VTE6 544 aaKnown RBP14.16□□□□□ -0.14
TRAF3-207ENST00000559734 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
TRAF3-207ENST00000559734 PLEKHF1Q96S99 279 aa14.15□□□□□ -0.14
TRAF3-207ENST00000559734 SCARF1Q14162 830 aa14.14□□□□□ -0.15
TRAF3-207ENST00000559734 PKN2Q16513 984 aaKnown RBP14.14□□□□□ -0.15
TRAF3-207ENST00000559734 MOB2Q70IA6 237 aa14.14□□□□□ -0.15
TRAF3-207ENST00000559734 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
TRAF3-207ENST00000559734 SCAF8Q9UPN6 1271 aaKnown RBP14.14□□□□□ -0.15
TRAF3-207ENST00000559734 POLR2AP24928 1970 aaKnown RBP14.13□□□□□ -0.15
TRAF3-207ENST00000559734 ATP5J2-PTCD1G3V325 749 aa14.13□□□□□ -0.15
TRAF3-207ENST00000559734 UFL1O94874 794 aa14.13□□□□□ -0.15
TRAF3-207ENST00000559734 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
TRAF3-207ENST00000559734 TTLL12Q14166 644 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-207ENST00000559734 TBC1D16Q8TBP0 767 aa14.13□□□□□ -0.15
TRAF3-207ENST00000559734 FAM89AQ96GI7 184 aa14.13□□□□□ -0.15
TRAF3-207ENST00000559734 ZC3H12CQ9C0D7 883 aaKnown RBP14.13□□□□□ -0.15
TRAF3-207ENST00000559734 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
TRAF3-207ENST00000559734 COL4A1P02462 1669 aa14.12□□□□□ -0.15
TRAF3-207ENST00000559734 VIL1P09327 827 aaKnown RBP14.12□□□□□ -0.15
TRAF3-207ENST00000559734 PNNQ9H307 717 aaKnown RBP14.12□□□□□ -0.15
TRAF3-207ENST00000559734 PAPPA2Q9BXP8 1791 aa14.11□□□□□ -0.15
TRAF3-207ENST00000559734 UBE2Q2LH0YL09 131 aa14.11□□□□□ -0.15
TRAF3-207ENST00000559734 RIPK4P57078 832 aa14.11□□□□□ -0.15
TRAF3-207ENST00000559734 FKBP1BP68106 108 aa14.11□□□□□ -0.15
TRAF3-207ENST00000559734 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
TRAF3-207ENST00000559734 CHPF2Q9P2E5 772 aa14.11□□□□□ -0.15
TRAF3-207ENST00000559734 ANKIB1Q9P2G1 1089 aa14.11□□□□□ -0.15
TRAF3-207ENST00000559734 GPR25O00155 361 aa14.1□□□□□ -0.15
TRAF3-207ENST00000559734 RPS8P62241 208 aaKnown RBP14.1□□□□□ -0.15
TRAF3-207ENST00000559734 KRT24Q2M2I5 525 aa14.1□□□□□ -0.15
TRAF3-207ENST00000559734 PRAMEF18Q5VWM3 479 aa14.1□□□□□ -0.15
TRAF3-207ENST00000559734 RSBN1LQ6PCB5 846 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-207ENST00000559734 GCC1Q96CN9 775 aa14.1□□□□□ -0.15
TRAF3-207ENST00000559734 MYOZ2Q9NPC6 264 aa14.1□□□□□ -0.15
TRAF3-207ENST00000559734 IRS4O14654 1257 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-207ENST00000559734 ZNF280AP59817 542 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-207ENST00000559734 FBXO46Q6PJ61 603 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-207ENST00000559734 PLBD2Q8NHP8 589 aa14.09□□□□□ -0.15
TRAF3-207ENST00000559734 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
TRAF3-207ENST00000559734 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
TRAF3-207ENST00000559734 SCN9AQ15858 1988 aa14.09□□□□□ -0.15
TRAF3-207ENST00000559734 USP17L8P0C7I0 530 aa14.08□□□□□ -0.16
TRAF3-207ENST00000559734 HDGFL1Q5TGJ6 251 aa14.08□□□□□ -0.16
TRAF3-207ENST00000559734 ANKRD13DQ6ZTN6 518 aa14.08□□□□□ -0.16
TRAF3-207ENST00000559734 AGBL3Q8NEM8 1001 aa14.08□□□□□ -0.16
TRAF3-207ENST00000559734 ISCA1Q9BUE6 129 aa14.08□□□□□ -0.16
TRAF3-207ENST00000559734 SEC31BQ9NQW1 1179 aa14.08□□□□□ -0.16
TRAF3-207ENST00000559734 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
TRAF3-207ENST00000559734 FKTNO75072 461 aa14.07□□□□□ -0.16
TRAF3-207ENST00000559734 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
TRAF3-207ENST00000559734 FBXW7Q969H0 707 aa14.07□□□□□ -0.16
TRAF3-207ENST00000559734 CCDC85AQ96PX6 553 aaPredicted RBP14.07□□□□□ -0.16
TRAF3-207ENST00000559734 PITPNM2Q9BZ72 1349 aa14.07□□□□□ -0.16
TRAF3-207ENST00000559734 NF2P35240 595 aa14.06□□□□□ -0.16
TRAF3-207ENST00000559734 LMOD3Q0VAK6 560 aa14.06□□□□□ -0.16
TRAF3-207ENST00000559734 SREBF2Q12772 1141 aa14.06□□□□□ -0.16
TRAF3-207ENST00000559734 PRKG1Q13976 671 aa14.06□□□□□ -0.16
TRAF3-207ENST00000559734 BABAM1Q9NWV8 329 aa14.06□□□□□ -0.16
TRAF3-207ENST00000559734 PODXL2Q9NZ53 605 aa14.06□□□□□ -0.16
TRAF3-207ENST00000559734 USP17L3A6NCW0 530 aa14.05□□□□□ -0.16
TRAF3-207ENST00000559734 USP17L4A6NCW7 530 aa14.05□□□□□ -0.16
TRAF3-207ENST00000559734 TM4SF4P48230 202 aa14.05□□□□□ -0.16
TRAF3-207ENST00000559734 NEUROD2Q15784 382 aa14.05□□□□□ -0.16
TRAF3-207ENST00000559734 NBPF9Q3BBW0 867 aa14.05□□□□□ -0.16
TRAF3-207ENST00000559734 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
TRAF3-207ENST00000559734 USP17L1Q7RTZ2 530 aa14.05□□□□□ -0.16
TRAF3-207ENST00000559734 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
TRAF3-207ENST00000559734 RIC3Q7Z5B4 369 aa14.04□□□□□ -0.16
TRAF3-207ENST00000559734 MXD3Q9BW11 206 aa14.04□□□□□ -0.16
TRAF3-207ENST00000559734 R3HDMLQ9H3Y0 253 aa14.04□□□□□ -0.16
TRAF3-207ENST00000559734 TRIM17Q9Y577 477 aa14.04□□□□□ -0.16
TRAF3-207ENST00000559734 ZNF609O15014 1411 aa14.04□□□□□ -0.16
TRAF3-207ENST00000559734 POTEFA5A3E0 1075 aa14.03□□□□□ -0.16
TRAF3-207ENST00000559734 CCDC152Q4G0S7 254 aa14.03□□□□□ -0.16
TRAF3-207ENST00000559734 ARMC9Q7Z3E5 817 aa14.03□□□□□ -0.16
TRAF3-207ENST00000559734 JARID2Q92833 1246 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-207ENST00000559734 GMLQ99445 158 aa14.03□□□□□ -0.16
TRAF3-207ENST00000559734 DBF4Q9UBU7 674 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-207ENST00000559734 XDHP47989 1333 aa14.03□□□□□ -0.16
TRAF3-207ENST00000559734 SASH1O94885 1247 aa14.02□□□□□ -0.17
TRAF3-207ENST00000559734 ATP2B4P23634 1241 aa14.02□□□□□ -0.17
TRAF3-207ENST00000559734 PTPN12Q05209 780 aaKnown RBP14.02□□□□□ -0.17
TRAF3-207ENST00000559734 NOM1Q5C9Z4 860 aaKnown RBP14.02□□□□□ -0.17
TRAF3-207ENST00000559734 ANKRD18AQ8IVF6 992 aa14.02□□□□□ -0.17
TRAF3-207ENST00000559734 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.17
TRAF3-207ENST00000559734 OGFOD1Q8N543 542 aa14.02□□□□□ -0.17
TRAF3-207ENST00000559734 ZBTB38Q8NAP3 1195 aaPredicted RBP14.02□□□□□ -0.17
TRAF3-207ENST00000559734 MYD88Q99836 296 aa14.02□□□□□ -0.17
TRAF3-207ENST00000559734 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
TRAF3-207ENST00000559734 GOLGA2Q08379 1002 aa14.01□□□□□ -0.17
TRAF3-207ENST00000559734 PODNQ7Z5L7 613 aa14.01□□□□□ -0.17
TRAF3-207ENST00000559734 HYPKQ9NX55 129 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms