RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
HMG20A-209ENST00000559728 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
HMG20A-209ENST00000559728 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
HMG20A-209ENST00000559728 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 C21orf2O43822 256 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 BBOX1O75936 387 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 GNAI2P04899 355 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 PRELPP51888 382 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
HMG20A-209ENST00000559728 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
HMG20A-209ENST00000559728 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
HMG20A-209ENST00000559728 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 DDX19BQ9UMR2 479 aa11.35□□□□□ -0.59
HMG20A-209ENST00000559728 NFKBIEO00221 500 aa11.34□□□□□ -0.59
HMG20A-209ENST00000559728 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
HMG20A-209ENST00000559728 PTPN12Q05209 780 aaKnown RBP11.34□□□□□ -0.59
HMG20A-209ENST00000559728 CEP85Q6P2H3 762 aa11.34□□□□□ -0.59
HMG20A-209ENST00000559728 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
HMG20A-209ENST00000559728 PUS3Q9BZE2 481 aaKnown RBP11.34□□□□□ -0.59
HMG20A-209ENST00000559728 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
HMG20A-209ENST00000559728 SLX4Q8IY92 1834 aa11.33□□□□□ -0.6
HMG20A-209ENST00000559728 WTIPA6NIX2 430 aaPredicted RBP11.33□□□□□ -0.6
HMG20A-209ENST00000559728 SP8Q8IXZ3 490 aa11.33□□□□□ -0.6
HMG20A-209ENST00000559728 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
HMG20A-209ENST00000559728 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
HMG20A-209ENST00000559728 GPSM2P81274 684 aa11.32□□□□□ -0.6
HMG20A-209ENST00000559728 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
HMG20A-209ENST00000559728 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
HMG20A-209ENST00000559728 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
HMG20A-209ENST00000559728 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
HMG20A-209ENST00000559728 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
HMG20A-209ENST00000559728 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
HMG20A-209ENST00000559728 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 RASSF7Q02833 373 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 GPR162Q16538 588 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
HMG20A-209ENST00000559728 COPRSQ9NQ92 184 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
HMG20A-209ENST00000559728 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.31□□□□□ -0.6
HMG20A-209ENST00000559728 DUOX1Q9NRD9 1551 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
HMG20A-209ENST00000559728 TAF1P21675 1872 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 SNAP23O00161 211 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 SRGAP3O43295 1099 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 IRX6P78412 446 aaPredicted RBP11.3□□□□□ -0.6
HMG20A-209ENST00000559728 GSE1Q14687 1217 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 CCDC93Q567U6 631 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
HMG20A-209ENST00000559728 VGLL2Q8N8G2 317 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
HMG20A-209ENST00000559728 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 HDAC5Q9UQL6 1122 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
HMG20A-209ENST00000559728 LRRC37AA6NMS7 1700 aa11.29□□□□□ -0.6
HMG20A-209ENST00000559728 LTBP1Q14766 1721 aa11.29□□□□□ -0.6
HMG20A-209ENST00000559728 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
HMG20A-209ENST00000559728 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
HMG20A-209ENST00000559728 LDHAL6AQ6ZMR3 332 aa11.29□□□□□ -0.6
HMG20A-209ENST00000559728 PSMD1Q99460 953 aa11.29□□□□□ -0.6
HMG20A-209ENST00000559728 COL4A5P29400 1685 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 EYA2O00167 538 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 GRIN3BO60391 1043 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
HMG20A-209ENST00000559728 CHRNDQ07001 517 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
HMG20A-209ENST00000559728 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 TBC1D16Q8TBP0 767 aa11.28□□□□□ -0.6
HMG20A-209ENST00000559728 GPR101Q96P66 508 aaPredicted RBP11.28□□□□□ -0.6
HMG20A-209ENST00000559728 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
HMG20A-209ENST00000559728 TAF5LO75529 589 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 CIAO1O76071 339 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 SASH1O94885 1247 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 KLRK1P26718 216 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 MPNDQ8N594 471 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
HMG20A-209ENST00000559728 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
HMG20A-209ENST00000559728 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
HMG20A-209ENST00000559728 FGFR2P21802 821 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 EVX2Q03828 476 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
HMG20A-209ENST00000559728 TXNRD3Q86VQ6 643 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 SIL1Q9H173 461 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
HMG20A-209ENST00000559728 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
HMG20A-209ENST00000559728 ZNF277Q9NRM2 450 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms