RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 RAD17O75943 681 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 CSF1RP07333 972 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 SCNN1DP51172 638 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 CXCL9Q07325 125 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 PODXL2Q9NZ53 605 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
BMP4-208ENST00000559642 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 SCN9AQ15858 1988 aa16.33■□□□□ 0.2
BMP4-208ENST00000559642 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
BMP4-208ENST00000559642 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
BMP4-208ENST00000559642 EPHX2P34913 555 aa16.32■□□□□ 0.2
BMP4-208ENST00000559642 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
BMP4-208ENST00000559642 XDHP47989 1333 aa16.32■□□□□ 0.2
BMP4-208ENST00000559642 DOK7Q18PE1 504 aa16.32■□□□□ 0.2
BMP4-208ENST00000559642 EAPPQ56P03 285 aaPredicted RBP16.32■□□□□ 0.2
BMP4-208ENST00000559642 EYA3Q99504 573 aa16.32■□□□□ 0.2
BMP4-208ENST00000559642 BSDC1Q9NW68 430 aaPredicted RBP16.32■□□□□ 0.2
BMP4-208ENST00000559642 ECE2O60344 883 aa16.31■□□□□ 0.2
BMP4-208ENST00000559642 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
BMP4-208ENST00000559642 CIAPIN1Q6FI81 312 aa16.31■□□□□ 0.2
BMP4-208ENST00000559642 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
BMP4-208ENST00000559642 SUCLG2Q96I99 432 aa16.31■□□□□ 0.2
BMP4-208ENST00000559642 MINPP1Q9UNW1 487 aa16.31■□□□□ 0.2
BMP4-208ENST00000559642 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
BMP4-208ENST00000559642 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
BMP4-208ENST00000559642 EPS15P42566 896 aa16.3■□□□□ 0.2
BMP4-208ENST00000559642 GMPSP49915 693 aaPredicted RBP16.3■□□□□ 0.2
BMP4-208ENST00000559642 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
BMP4-208ENST00000559642 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
BMP4-208ENST00000559642 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
BMP4-208ENST00000559642 PSME4Q14997 1843 aa16.3■□□□□ 0.2
BMP4-208ENST00000559642 UTYO14607 1347 aa16.29■□□□□ 0.2
BMP4-208ENST00000559642 HTRA3P83110 453 aa16.29■□□□□ 0.2
BMP4-208ENST00000559642 IFIT5Q13325 482 aaKnown RBP16.29■□□□□ 0.2
BMP4-208ENST00000559642 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
BMP4-208ENST00000559642 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
BMP4-208ENST00000559642 MPHOSPH8Q99549 860 aa16.29■□□□□ 0.2
BMP4-208ENST00000559642 KCNQ5Q9NR82 932 aa16.29■□□□□ 0.2
BMP4-208ENST00000559642 ATP2B4P23634 1241 aa16.28■□□□□ 0.2
BMP4-208ENST00000559642 APLP1P51693 650 aa16.28■□□□□ 0.2
BMP4-208ENST00000559642 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
BMP4-208ENST00000559642 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
BMP4-208ENST00000559642 GPRC5DQ9NZD1 345 aa16.28■□□□□ 0.2
BMP4-208ENST00000559642 ZNF646O15015 1829 aaPredicted RBP16.28■□□□□ 0.2
BMP4-208ENST00000559642 MED23Q9ULK4 1368 aa16.27■□□□□ 0.2
BMP4-208ENST00000559642 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
BMP4-208ENST00000559642 PSMD14O00487 310 aa16.27■□□□□ 0.2
BMP4-208ENST00000559642 CCT4P50991 539 aaKnown RBP16.27■□□□□ 0.2
BMP4-208ENST00000559642 TNIP1Q15025 636 aa16.27■□□□□ 0.2
BMP4-208ENST00000559642 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.2
BMP4-208ENST00000559642 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.2
BMP4-208ENST00000559642 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
BMP4-208ENST00000559642 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 G3V3G9 751 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 KLRK1P26718 216 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
BMP4-208ENST00000559642 CHRNDQ07001 517 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 CCDC57Q2TAC2 916 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 TAF7LQ5H9L4 462 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 PNMA8AQ86V59 439 aaPredicted RBP16.26■□□□□ 0.19
BMP4-208ENST00000559642 USP44Q9H0E7 712 aa16.26■□□□□ 0.19
BMP4-208ENST00000559642 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
BMP4-208ENST00000559642 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
BMP4-208ENST00000559642 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
BMP4-208ENST00000559642 HELBQ8NG08 1087 aaPredicted RBP16.25■□□□□ 0.19
BMP4-208ENST00000559642 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
BMP4-208ENST00000559642 ZNF804BA4D1E1 1349 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 SNAP23O00161 211 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 TAF5LO75529 589 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 BCAR3O75815 825 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
BMP4-208ENST00000559642 TXNRD3Q86VQ6 643 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 ADARB2Q9NS39 739 aaKnown RBP16.24■□□□□ 0.19
BMP4-208ENST00000559642 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
BMP4-208ENST00000559642 KCNJ4P48050 445 aa16.23■□□□□ 0.19
BMP4-208ENST00000559642 MICALL2Q8IY33 904 aa16.23■□□□□ 0.19
BMP4-208ENST00000559642 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
BMP4-208ENST00000559642 CNNM1Q9NRU3 951 aa16.23■□□□□ 0.19
BMP4-208ENST00000559642 LEMD3Q9Y2U8 911 aa16.23■□□□□ 0.19
BMP4-208ENST00000559642 LDHAL6AQ6ZMR3 332 aa16.22■□□□□ 0.19
BMP4-208ENST00000559642 USP50Q70EL3 339 aaPredicted RBP16.22■□□□□ 0.19
BMP4-208ENST00000559642 FRAT1Q92837 279 aaPredicted RBP16.22■□□□□ 0.19
BMP4-208ENST00000559642 PUS3Q9BZE2 481 aaKnown RBP16.22■□□□□ 0.19
BMP4-208ENST00000559642 CNOT7Q9UIV1 285 aaKnown RBP16.22■□□□□ 0.19
BMP4-208ENST00000559642 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
BMP4-208ENST00000559642 PLIN1O60240 522 aa16.21■□□□□ 0.19
BMP4-208ENST00000559642 ITGBL1O95965 494 aaPredicted RBP16.21■□□□□ 0.19
BMP4-208ENST00000559642 KLHDC4Q8TBB5 520 aa16.21■□□□□ 0.19
BMP4-208ENST00000559642 CEP350Q5VT06 3117 aa16.21■□□□□ 0.18
BMP4-208ENST00000559642 IRS2Q9Y4H2 1338 aa16.2■□□□□ 0.18
BMP4-208ENST00000559642 EGFRP00533 1210 aa16.2■□□□□ 0.18
BMP4-208ENST00000559642 VIL1P09327 827 aaKnown RBP16.2■□□□□ 0.18
BMP4-208ENST00000559642 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
BMP4-208ENST00000559642 TRIM27P14373 513 aa16.2■□□□□ 0.18
BMP4-208ENST00000559642 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
BMP4-208ENST00000559642 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
BMP4-208ENST00000559642 CNTROBQ8N137 903 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms