RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 KLRK1P26718 216 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 POLA2Q14181 598 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 CCDC93Q567U6 631 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 ATG9AQ7Z3C6 839 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
TPM1-217ENST00000559108 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
TPM1-217ENST00000559108 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
TPM1-217ENST00000559108 SRGAP3O43295 1099 aa13.64□□□□□ -0.23
TPM1-217ENST00000559108 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
TPM1-217ENST00000559108 HELBQ8NG08 1087 aaPredicted RBP13.64□□□□□ -0.23
TPM1-217ENST00000559108 BSDC1Q9NW68 430 aaPredicted RBP13.64□□□□□ -0.23
TPM1-217ENST00000559108 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
TPM1-217ENST00000559108 RIPOR2Q9Y4F9 1068 aa13.64□□□□□ -0.23
TPM1-217ENST00000559108 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
TPM1-217ENST00000559108 PSME4Q14997 1843 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 TAF5LO75529 589 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 CHRNDQ07001 517 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 ZNF277Q9NRM2 450 aaPredicted RBP13.63□□□□□ -0.23
TPM1-217ENST00000559108 LTBP3Q9NS15 1303 aa13.63□□□□□ -0.23
TPM1-217ENST00000559108 IGHMBP2P38935 993 aaKnown RBP13.62□□□□□ -0.23
TPM1-217ENST00000559108 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
TPM1-217ENST00000559108 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
TPM1-217ENST00000559108 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
TPM1-217ENST00000559108 RTFDC1Q9BY42 306 aaPredicted RBP13.62□□□□□ -0.23
TPM1-217ENST00000559108 SIL1Q9H173 461 aa13.62□□□□□ -0.23
TPM1-217ENST00000559108 TAOK3Q9H2K8 898 aa13.62□□□□□ -0.23
TPM1-217ENST00000559108 COPRSQ9NQ92 184 aa13.62□□□□□ -0.23
TPM1-217ENST00000559108 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
TPM1-217ENST00000559108 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
TPM1-217ENST00000559108 PSMD1Q99460 953 aa13.61□□□□□ -0.23
TPM1-217ENST00000559108 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
TPM1-217ENST00000559108 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
TPM1-217ENST00000559108 EYA2O00167 538 aa13.6□□□□□ -0.23
TPM1-217ENST00000559108 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
TPM1-217ENST00000559108 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
TPM1-217ENST00000559108 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
TPM1-217ENST00000559108 MPNDQ8N594 471 aa13.6□□□□□ -0.23
TPM1-217ENST00000559108 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
TPM1-217ENST00000559108 XDHP47989 1333 aa13.6□□□□□ -0.23
TPM1-217ENST00000559108 UFL1O94874 794 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 SASH1O94885 1247 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 AOC3Q16853 763 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 TAF7LQ5H9L4 462 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 C9orf131Q5VYM1 1079 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 RTKN2Q8IZC4 609 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
TPM1-217ENST00000559108 CIAO1O76071 339 aa13.58□□□□□ -0.24
TPM1-217ENST00000559108 IARSP41252 1262 aaKnown RBP13.58□□□□□ -0.24
TPM1-217ENST00000559108 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
TPM1-217ENST00000559108 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
TPM1-217ENST00000559108 ANKIB1Q9P2G1 1089 aa13.58□□□□□ -0.24
TPM1-217ENST00000559108 MYH13Q9UKX3 1938 aa13.58□□□□□ -0.24
TPM1-217ENST00000559108 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 LMNB1P20700 586 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
TPM1-217ENST00000559108 ZNF804BA4D1E1 1349 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
TPM1-217ENST00000559108 ZNF609O15014 1411 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 FGFR2P21802 821 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 TFCP2Q12800 502 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 METTL24Q5JXM2 366 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
TPM1-217ENST00000559108 KCNQ5Q9NR82 932 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 HDAC5Q9UQL6 1122 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 MED23Q9ULK4 1368 aa13.56□□□□□ -0.24
TPM1-217ENST00000559108 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
TPM1-217ENST00000559108 PPIP5K2O43314 1243 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 PDE8BO95263 885 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 ADORA1P30542 326 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 DOK7Q18PE1 504 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 ANKRD2Q9GZV1 360 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 DBNDD1Q9H9R9 158 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 MROH5Q6ZUA9 1318 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 ADAMTSL1Q8N6G6 1762 aa13.55□□□□□ -0.24
TPM1-217ENST00000559108 SURF6O75683 361 aaKnown RBP13.54□□□□□ -0.24
TPM1-217ENST00000559108 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
TPM1-217ENST00000559108 IL15P40933 162 aaPredicted RBP13.54□□□□□ -0.24
TPM1-217ENST00000559108 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
TPM1-217ENST00000559108 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
TPM1-217ENST00000559108 AKAP11Q9UKA4 1901 aa13.54□□□□□ -0.24
TPM1-217ENST00000559108 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
TPM1-217ENST00000559108 IGHDP01880 384 aa13.53□□□□□ -0.24
TPM1-217ENST00000559108 GYG1P46976 350 aa13.53□□□□□ -0.24
TPM1-217ENST00000559108 WASHC4Q2M389 1173 aa13.53□□□□□ -0.24
TPM1-217ENST00000559108 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
TPM1-217ENST00000559108 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
TPM1-217ENST00000559108 TLR7Q9NYK1 1049 aaKnown RBP13.53□□□□□ -0.24
TPM1-217ENST00000559108 FZD9O00144 591 aa13.52□□□□□ -0.25
TPM1-217ENST00000559108 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.25
TPM1-217ENST00000559108 FAM84BQ96KN1 310 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms