RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, human

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF111-204	ENST00000559077	OIP5	O43482	229 aa		11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	GPR37L1	O60883	481 aa		11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	SNRPN	P63162	240 aa	Known RBP	11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	NLRP3	Q96P20	1036 aa		11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	SLAIN2	Q9P270	581 aa		11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	SSH2	Q76I76	1423 aa		11.25	□□□□□ -0.61
RNF111-204	ENST00000559077	ANKRD26	Q9UPS8	1709 aa		11.24	□□□□□ -0.61
RNF111-204	ENST00000559077	KRBA1	A5PL33	1030 aa		11.24	□□□□□ -0.61
RNF111-204	ENST00000559077	TOM1	O60784	492 aa		11.24	□□□□□ -0.61
RNF111-204	ENST00000559077	FBXO45	P0C2W1	286 aa		11.24	□□□□□ -0.61
RNF111-204	ENST00000559077	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.24	□□□□□ -0.61
RNF111-204	ENST00000559077	SBNO1	A3KN83	1393 aa		11.24	□□□□□ -0.61
RNF111-204	ENST00000559077	KIF20B	Q96Q89	1820 aa		11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	GRIN2C	Q14957	1233 aa		11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	NLRP13	Q86W25	1043 aa		11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	NUCKS1	Q9H1E3	243 aa	Known RBP	11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	TTC21B	Q7Z4L5	1316 aa		11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	USP31	Q70CQ4	1352 aa		11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	USP54	Q70EL1	1684 aa		11.23	□□□□□ -0.61
RNF111-204	ENST00000559077	RGPD8	O14715	1765 aa	Predicted RBP	11.22	□□□□□ -0.61
RNF111-204	ENST00000559077	ARHGEF10	O15013	1369 aa		11.22	□□□□□ -0.61
RNF111-204	ENST00000559077	MTMR14	Q8NCE2	650 aa		11.22	□□□□□ -0.61
RNF111-204	ENST00000559077	PSMG3-AS1	Q96PY0	264 aa		11.22	□□□□□ -0.61
RNF111-204	ENST00000559077	KRTAP4-8	Q9BYQ9	185 aa		11.22	□□□□□ -0.61
RNF111-204	ENST00000559077	ZBBX	A8MT70	800 aa		11.21	□□□□□ -0.61
RNF111-204	ENST00000559077	MAP2K3	P46734	347 aa		11.21	□□□□□ -0.61
RNF111-204	ENST00000559077	MORC1	Q86VD1	984 aa		11.21	□□□□□ -0.61
RNF111-204	ENST00000559077	COG3	Q96JB2	828 aa		11.21	□□□□□ -0.61
RNF111-204	ENST00000559077	LRRC4B	Q9NT99	713 aa		11.21	□□□□□ -0.61
RNF111-204	ENST00000559077	KIF24	Q5T7B8	1368 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077	AATK	Q6ZMQ8	1374 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077		A0A1W2PRU2	124 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077	FYB1	O15117	783 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077	AMPD1	P23109	780 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077	GPC1	P35052	558 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077	PMFBP1	Q8TBY8	1022 aa		11.2	□□□□□ -0.62
RNF111-204	ENST00000559077	OVOS2	A0A0J9YW53	1432 aa		11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	OVOS2	Q6IE36	1432 aa		11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	CC2D1B	Q5T0F9	858 aa	Known RBP	11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	BRINP3	Q76B58	766 aa		11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	TIMMDC1	Q9NPL8	285 aa		11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	SNRK	Q9NRH2	765 aa		11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.19	□□□□□ -0.62
RNF111-204	ENST00000559077	NHSL1	Q5SYE7	1610 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	GIGYF1	O75420	1035 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	KCNH5	Q8NCM2	988 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	CFAP53	Q96M91	514 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	ORAI2	Q96SN7	254 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	PCDHB9	Q9Y5E1	797 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	PXDN	Q92626	1479 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	TNS3	Q68CZ2	1445 aa		11.18	□□□□□ -0.62
RNF111-204	ENST00000559077	INSR	P06213	1382 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	SHISA8	B8ZZ34	492 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	FOXO3	O43524	673 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	NBPF10	Q6P3W6	841 aa	Known RBP	11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	KRT28	Q7Z3Y7	464 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	SEPT12	Q8IYM1	358 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	NBPF15	Q8N660	670 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	BANK1	Q8NDB2	785 aa		11.17	□□□□□ -0.62
RNF111-204	ENST00000559077	MED1	Q15648	1581 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	ERICH6	Q7L0X2	663 aa		11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	ALYREF	Q86V81	257 aa	Known RBP	11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	ABTB2	Q8N961	1025 aa		11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	GPAM	Q9HCL2	828 aa		11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	PIK3C2A	O00443	1686 aa		11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	SMG6	Q86US8	1419 aa	Known RBP	11.16	□□□□□ -0.62
RNF111-204	ENST00000559077	ABCC6	O95255	1503 aa		11.15	□□□□□ -0.62
RNF111-204	ENST00000559077	ALS2	Q96Q42	1657 aa		11.15	□□□□□ -0.62
RNF111-204	ENST00000559077	ROBO1	Q9Y6N7	1651 aa		11.15	□□□□□ -0.62
RNF111-204	ENST00000559077	COL8A1	P27658	744 aa		11.15	□□□□□ -0.62
RNF111-204	ENST00000559077	PPP2R1A	P30153	589 aa		11.15	□□□□□ -0.62
RNF111-204	ENST00000559077	GGNBP2	Q9H3C7	697 aa		11.15	□□□□□ -0.62
RNF111-204	ENST00000559077	RTL1	A6NKG5	1358 aa		11.15	□□□□□ -0.63
RNF111-204	ENST00000559077	USP19	O94966	1318 aa		11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	SPATA31A3	Q5VYP0	1347 aa		11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	F11	P03951	625 aa		11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	TMEM132A	Q24JP5	1023 aa		11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	NME9	Q86XW9	330 aa		11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	LRRC59	Q96AG4	307 aa	Known RBP	11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	PHF24	Q9UPV7	400 aa		11.14	□□□□□ -0.63
RNF111-204	ENST00000559077	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	UBAP1L	F5GYI3	381 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	SOCS7	O14512	581 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	NR1H3	Q13133	447 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	TAS1R3	Q7RTX0	852 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	EDARADD	Q8WWZ3	215 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	MRS2	Q9HD23	443 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	GDF2	Q9UK05	429 aa	Predicted RBP	11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	SLIT3	O75094	1523 aa		11.13	□□□□□ -0.63
RNF111-204	ENST00000559077	KLRG1	Q96E93	195 aa		11.12	□□□□□ -0.63
RNF111-204	ENST00000559077	NUDC	Q9Y266	331 aa		11.12	□□□□□ -0.63
RNF111-204	ENST00000559077	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.12	□□□□□ -0.63
RNF111-204	ENST00000559077	CC2D2B	Q6DHV5	1058 aa		11.11	□□□□□ -0.63
RNF111-204	ENST00000559077	HOMEZ	Q8IX15	550 aa		11.11	□□□□□ -0.63
RNF111-204	ENST00000559077	NDUFB9	Q9Y6M9	179 aa		11.11	□□□□□ -0.63
RNF111-204	ENST00000559077	FLT4	P35916	1363 aa		11.11	□□□□□ -0.63
RNF111-204	ENST00000559077	PNPLA6	Q8IY17	1366 aa		11.11	□□□□□ -0.63

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