RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 TPM3P06753 285 aa10.49□□□□□ -0.73
EXD1-204ENST00000558881 FAM193AP78312 1265 aa10.49□□□□□ -0.73
EXD1-204ENST00000558881 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
EXD1-204ENST00000558881 USP26Q9BXU7 913 aa10.49□□□□□ -0.73
EXD1-204ENST00000558881 TMOD3Q9NYL9 352 aa10.49□□□□□ -0.73
EXD1-204ENST00000558881 USP25Q9UHP3 1055 aa10.49□□□□□ -0.73
EXD1-204ENST00000558881 MORC2Q9Y6X9 1032 aaPredicted RBP10.49□□□□□ -0.73
EXD1-204ENST00000558881 GLI3P10071 1580 aa10.48□□□□□ -0.73
EXD1-204ENST00000558881 PIP4K2BP78356 416 aa10.48□□□□□ -0.73
EXD1-204ENST00000558881 TERF2Q15554 542 aa10.48□□□□□ -0.73
EXD1-204ENST00000558881 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
EXD1-204ENST00000558881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
EXD1-204ENST00000558881 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
EXD1-204ENST00000558881 TRIM6-TRIM34B2RNG4 842 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 BRD1O95696 1058 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 MAP4K4O95819 1239 aaPredicted RBP10.47□□□□□ -0.73
EXD1-204ENST00000558881 OS9Q13438 667 aaPredicted RBP10.47□□□□□ -0.73
EXD1-204ENST00000558881 PLBD2Q8NHP8 589 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 HDAC5Q9UQL6 1122 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 AHDC1Q5TGY3 1603 aaPredicted RBP10.47□□□□□ -0.73
EXD1-204ENST00000558881 HSP90AB4PQ58FF6 505 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 KLHDC4Q8TBB5 520 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 ATG3Q9NT62 314 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 TRPC6Q9Y210 931 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 DISP2A7MBM2 1401 aa10.47□□□□□ -0.73
EXD1-204ENST00000558881 NUTM2BA6NNL0 878 aaPredicted RBP10.46□□□□□ -0.73
EXD1-204ENST00000558881 NUTM2EB1AL46 878 aaPredicted RBP10.46□□□□□ -0.73
EXD1-204ENST00000558881 CASC1Q6TDU7 716 aa10.46□□□□□ -0.73
EXD1-204ENST00000558881 CREBRFQ8IUR6 639 aa10.46□□□□□ -0.73
EXD1-204ENST00000558881 NUTM2AQ8IVF1 878 aaPredicted RBP10.46□□□□□ -0.73
EXD1-204ENST00000558881 PI4K2BQ8TCG2 481 aa10.46□□□□□ -0.73
EXD1-204ENST00000558881 CHAMP1Q96JM3 812 aa10.46□□□□□ -0.73
EXD1-204ENST00000558881 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
EXD1-204ENST00000558881 TNS2Q63HR2 1409 aa10.46□□□□□ -0.73
EXD1-204ENST00000558881 A0A087WZG4 1122 aa10.46□□□□□ -0.74
EXD1-204ENST00000558881 EXOC5O00471 708 aa10.46□□□□□ -0.74
EXD1-204ENST00000558881 SASH1O94885 1247 aa10.46□□□□□ -0.74
EXD1-204ENST00000558881 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.74
EXD1-204ENST00000558881 UBE3BQ7Z3V4 1068 aa10.46□□□□□ -0.74
EXD1-204ENST00000558881 TSPYL1Q9H0U9 437 aa10.46□□□□□ -0.74
EXD1-204ENST00000558881 CALCOCO1Q9P1Z2 691 aa10.46□□□□□ -0.74
EXD1-204ENST00000558881 COL16A1Q07092 1604 aaPredicted RBP10.45□□□□□ -0.74
EXD1-204ENST00000558881 CHMLP26374 656 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 DNAJC10Q8IXB1 793 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 MPNDQ8N594 471 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 SIL1Q9H173 461 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 ZBTB3Q9H5J0 574 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 COL14A1Q05707 1796 aaKnown RBP10.45□□□□□ -0.74
EXD1-204ENST00000558881 ERC2O15083 957 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 KDM4AO75164 1064 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 CASP7P55210 303 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 KCNF1Q9H3M0 494 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 AOX1Q06278 1338 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 TCHHQ07283 1943 aa10.45□□□□□ -0.74
EXD1-204ENST00000558881 G3BP1Q13283 466 aaKnown RBP eCLIP10.44□□□□□ -0.74
EXD1-204ENST00000558881 CLASRPQ8N2M8 674 aaKnown RBP10.44□□□□□ -0.74
EXD1-204ENST00000558881 KIF18AQ8NI77 898 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 SLC4A9Q96Q91 983 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 ESYT1Q9BSJ8 1104 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 PYCARDQ9ULZ3 195 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 TOGARAM1Q9Y4F4 1720 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 SMTNL1A8MU46 457 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 KRT222Q8N1A0 295 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 SYTL4Q96C24 671 aaPredicted RBP10.44□□□□□ -0.74
EXD1-204ENST00000558881 IL25Q9H293 177 aa10.44□□□□□ -0.74
EXD1-204ENST00000558881 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
EXD1-204ENST00000558881 COL22A1Q8NFW1 1626 aaPredicted RBP10.43□□□□□ -0.74
EXD1-204ENST00000558881 H7C1W4 665 aa10.43□□□□□ -0.74
EXD1-204ENST00000558881 CAPN2P17655 700 aa10.43□□□□□ -0.74
EXD1-204ENST00000558881 RFX5P48382 616 aaPredicted RBP10.43□□□□□ -0.74
EXD1-204ENST00000558881 CCDC183Q5T5S1 534 aa10.43□□□□□ -0.74
EXD1-204ENST00000558881 AACSQ86V21 672 aa10.43□□□□□ -0.74
EXD1-204ENST00000558881 ERC1Q8IUD2 1116 aa10.43□□□□□ -0.74
EXD1-204ENST00000558881 EAF2Q96CJ1 260 aaPredicted RBP10.43□□□□□ -0.74
EXD1-204ENST00000558881 FAM53CQ9NYF3 392 aa10.43□□□□□ -0.74
EXD1-204ENST00000558881 SPATA31A1Q5TZJ5 1347 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 USP42Q9H9J4 1324 aaKnown RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 TOM1O60784 492 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 REC8O95072 547 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 MCM2P49736 904 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 TMEM87AQ8NBN3 555 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 CCDC8Q9H0W5 538 aaPredicted RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 UBR2Q8IWV8 1755 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 PAPPAQ13219 1627 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 GOLGA6L6A8MZA4 724 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 IFIT2P09913 472 aaKnown RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 IRX3P78415 501 aaPredicted RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 PTPN12Q05209 780 aaKnown RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 CUL4AQ13619 759 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 RABL6Q3YEC7 729 aaPredicted RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
EXD1-204ENST00000558881 INTS4Q96HW7 963 aaKnown RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 TLR7Q9NYK1 1049 aaKnown RBP10.42□□□□□ -0.74
EXD1-204ENST00000558881 HCLS1P14317 486 aaPredicted RBP10.41□□□□□ -0.74
EXD1-204ENST00000558881 FOXO4P98177 505 aa10.41□□□□□ -0.74
EXD1-204ENST00000558881 LMBR1LQ6UX01 489 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms