RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	TEX13A	Q9BXU3	409 aa	Predicted RBP	9.31	□□□□□ -0.92
MARK3-215	ENST00000558787	NMRK2	Q9NPI5	230 aa		9.31	□□□□□ -0.92
MARK3-215	ENST00000558787	CARMIL3	Q8ND23	1372 aa		9.31	□□□□□ -0.92
MARK3-215	ENST00000558787	UBR2	Q8IWV8	1755 aa		9.31	□□□□□ -0.92
MARK3-215	ENST00000558787		A0A087WZG4	1122 aa		9.3	□□□□□ -0.92
MARK3-215	ENST00000558787	PPEF1	O14829	653 aa	Predicted RBP	9.3	□□□□□ -0.92
MARK3-215	ENST00000558787	RASSF7	Q02833	373 aa		9.3	□□□□□ -0.92
MARK3-215	ENST00000558787	SLC6A16	Q9GZN6	736 aa		9.3	□□□□□ -0.92
MARK3-215	ENST00000558787	RNF181	Q9P0P0	153 aa		9.3	□□□□□ -0.92
MARK3-215	ENST00000558787	BRCA1	P38398	1863 aa	Known RBP	9.3	□□□□□ -0.92
MARK3-215	ENST00000558787	SIPA1L3	O60292	1781 aa	Predicted RBP	9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	AFDN	P55196	1824 aa	Known RBP	9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	CAMTA2	O94983	1202 aa		9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	IL6ST	P40189	918 aa	Predicted RBP	9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	PRELP	P51888	382 aa		9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	PRR5L	Q6MZQ0	368 aa		9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	NLRP7	Q8WX94	980 aa		9.29	□□□□□ -0.92
MARK3-215	ENST00000558787	THUMPD2	Q9BTF0	503 aa	Known RBP	9.29	□□□□□ -0.92
MARK3-215	ENST00000558787		H0YIN7	160 aa		9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	TAF7	Q15545	349 aa	Predicted RBP	9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	NBPF10	Q6P3W6	841 aa	Known RBP	9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	DZIP3	Q86Y13	1208 aa	Known RBP	9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	NBPF15	Q8N660	670 aa		9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	TTLL6	Q8N841	843 aa		9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	ZNF622	Q969S3	477 aa	Known RBP eCLIP	9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	SPSB2	Q99619	263 aa		9.28	□□□□□ -0.92
MARK3-215	ENST00000558787	SNRPA1	P09661	255 aa	Known RBP	9.27	□□□□□ -0.93
MARK3-215	ENST00000558787	HSPA6	P17066	643 aa		9.27	□□□□□ -0.93
MARK3-215	ENST00000558787	SPRYD7	Q5W111	196 aa		9.27	□□□□□ -0.93
MARK3-215	ENST00000558787	NPM2	Q86SE8	214 aa	Known RBP	9.27	□□□□□ -0.93
MARK3-215	ENST00000558787	NGEF	Q8N5V2	710 aa		9.27	□□□□□ -0.93
MARK3-215	ENST00000558787	SETDB2	Q96T68	719 aa		9.27	□□□□□ -0.93
MARK3-215	ENST00000558787	ARFGEF1	Q9Y6D6	1849 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	NRXN2	Q9P2S2	1712 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	FAM177B	A6PVY3	158 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	HTATSF1	O43719	755 aa	Known RBP	9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	C21orf2	O43822	256 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	GCGR	P47871	477 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	ZNF598	Q86UK7	904 aa	Known RBP	9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	PLEKHF1	Q96S99	279 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	BRIP1	Q9BX63	1249 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	RRAGC	Q9HB90	399 aa		9.26	□□□□□ -0.93
MARK3-215	ENST00000558787	NFKBIE	O00221	500 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	NPHP1	O15259	732 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	TOMM70	O94826	608 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	PDE6B	P35913	854 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	FUT2	Q10981	343 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	DDX10	Q13206	875 aa	Known RBP	9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	NFE2L2	Q16236	605 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	HLF	Q16534	295 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	MORN1	Q5T089	497 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	CNBD1	Q8NA66	436 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	PHOX2B	Q99453	314 aa		9.25	□□□□□ -0.93
MARK3-215	ENST00000558787	NEFM	P07197	916 aa		9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	LMNB1	P20700	586 aa		9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	HTRA3	P83110	453 aa		9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	LIAT1	Q6ZQX7	453 aa		9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	NBPF5P	Q86XG9	351 aa	Predicted RBP	9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	EMID1	Q96A84	441 aa	Predicted RBP	9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	RRP7A	Q9Y3A4	280 aa	Known RBP	9.24	□□□□□ -0.93
MARK3-215	ENST00000558787	SBF1	O95248	1867 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	ANKRD31	Q8N7Z5	1873 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	SCN7A	Q01118	1682 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	LCE2B	O14633	110 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	FMNL1	O95466	1100 aa	Predicted RBP	9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	SRGN	P10124	158 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	MYL6B	P14649	208 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	EIF4A1	P60842	406 aa	Known RBP	9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	ST5	P78524	1137 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	MAP2K5	Q13163	448 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	GRIPAP1	Q4V328	841 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	C16orf71	Q8IYS4	520 aa	Predicted RBP	9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	KDM2B	Q8NHM5	1336 aa		9.23	□□□□□ -0.93
MARK3-215	ENST00000558787	RIPK4	P57078	832 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	ZNF697	Q5TEC3	545 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	STYK1	Q6J9G0	422 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	PRPF40B	Q6NWY9	871 aa	Known RBP	9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	OLFM4	Q6UX06	510 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	CLEC4G	Q6UXB4	293 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	TTLL7	Q6ZT98	887 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	CCDC146	Q8IYE0	955 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	MAPK8IP3	Q9UPT6	1336 aa		9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	COL11A2	P13942	1736 aa	Predicted RBP	9.22	□□□□□ -0.93
MARK3-215	ENST00000558787	DLG5	Q8TDM6	1919 aa		9.21	□□□□□ -0.93
MARK3-215	ENST00000558787	TRIM67	Q6ZTA4	783 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	NUTM1	Q86Y26	1132 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	PNISR	Q8TF01	805 aa	Known RBP	9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	CNKSR1	Q969H4	720 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	MASTL	Q96GX5	879 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	ZNF652	Q9Y2D9	606 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	SLC27A5	Q9Y2P5	690 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	DLEC1	Q9Y238	1755 aa		9.21	□□□□□ -0.94
MARK3-215	ENST00000558787	SLX4	Q8IY92	1834 aa		9.2	□□□□□ -0.94
MARK3-215	ENST00000558787	GLTPD2	A6NH11	291 aa		9.2	□□□□□ -0.94
MARK3-215	ENST00000558787	POTEC	B2RU33	542 aa		9.2	□□□□□ -0.94
MARK3-215	ENST00000558787	IRF6	O14896	467 aa		9.2	□□□□□ -0.94
MARK3-215	ENST00000558787	GPT	P24298	496 aa		9.2	□□□□□ -0.94
MARK3-215	ENST00000558787	PRR20E	P86478	221 aa		9.2	□□□□□ -0.94
MARK3-215	ENST00000558787	PRR20C	P86479	221 aa		9.2	□□□□□ -0.94

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