RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 LRRC2Q9BYS8 371 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
TMC3-202ENST00000558726 CWF19L2Q2TBE0 894 aaKnown RBP12.53□□□□□ -0.4
TMC3-202ENST00000558726 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
TMC3-202ENST00000558726 DEF6Q9H4E7 631 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 DNAI1Q9UI46 699 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 MTMR6Q9Y217 621 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 RNF17Q9BXT8 1623 aaKnown RBP12.53□□□□□ -0.4
TMC3-202ENST00000558726 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
TMC3-202ENST00000558726 BMP15O95972 392 aa12.52□□□□□ -0.4
TMC3-202ENST00000558726 KIAA1328Q86T90 577 aa12.52□□□□□ -0.4
TMC3-202ENST00000558726 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.4
TMC3-202ENST00000558726 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.4
TMC3-202ENST00000558726 ABCA6Q8N139 1617 aa12.52□□□□□ -0.4
TMC3-202ENST00000558726 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 G3V3G9 751 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
TMC3-202ENST00000558726 USP8P40818 1118 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
TMC3-202ENST00000558726 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 ALG1Q9BT22 464 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 BICC1Q9H694 974 aaKnown RBP12.52□□□□□ -0.41
TMC3-202ENST00000558726 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.41
TMC3-202ENST00000558726 TMEM67Q5HYA8 995 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.41
TMC3-202ENST00000558726 ANKRD18BA2A2Z9 1011 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
TMC3-202ENST00000558726 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
TMC3-202ENST00000558726 YEATS4O95619 227 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
TMC3-202ENST00000558726 CTAGE1Q96RT6 745 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
TMC3-202ENST00000558726 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 KLHL10Q6JEL2 608 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
TMC3-202ENST00000558726 ELP1O95163 1332 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 HAND2P61296 217 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
TMC3-202ENST00000558726 ZBTB43O43298 467 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 IGHMBP2P38935 993 aaKnown RBP12.5□□□□□ -0.41
TMC3-202ENST00000558726 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 PRC1O43663 620 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 KIAA0754O94854 1291 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 CCDC12Q8WUD4 166 aaPredicted RBP12.5□□□□□ -0.41
TMC3-202ENST00000558726 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 IFNKQ9P0W0 207 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 IQGAP1P46940 1657 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 SLC5A1P13866 664 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 SPAG1Q07617 926 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 CDC37L1Q7L3B6 337 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 TUBBP07437 444 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 ME3Q16798 604 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 IQCA1Q86XH1 822 aa12.5□□□□□ -0.41
TMC3-202ENST00000558726 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
TMC3-202ENST00000558726 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.41
TMC3-202ENST00000558726 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 CCDC85AQ96PX6 553 aaPredicted RBP12.49□□□□□ -0.41
TMC3-202ENST00000558726 CNNM2Q9H8M5 875 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 ADGRB3O60242 1522 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 LMOD1P29536 600 aaPredicted RBP12.49□□□□□ -0.41
TMC3-202ENST00000558726 EIF4A1P60842 406 aaKnown RBP12.49□□□□□ -0.41
TMC3-202ENST00000558726 STK11IPQ8N1F8 1099 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 CTCFLQ8NI51 663 aaPredicted RBP12.49□□□□□ -0.41
TMC3-202ENST00000558726 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 GLI2P10070 1586 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 TFCP2Q12800 502 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 KRT28Q7Z3Y7 464 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 KRT23Q9C075 422 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 ABCC3O15438 1527 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 QRICH2Q9H0J4 1663 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 MYL5Q02045 173 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 SPA17Q15506 151 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 LDHAL6AQ6ZMR3 332 aa12.49□□□□□ -0.41
TMC3-202ENST00000558726 C17orf53Q8N3J3 647 aaPredicted RBP12.49□□□□□ -0.41
TMC3-202ENST00000558726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.41
TMC3-202ENST00000558726 CEP152O94986 1710 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 CEP112Q8N8E3 955 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
TMC3-202ENST00000558726 SLC26A6Q9BXS9 759 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 FAM173BQ6P4H8 233 aa12.48□□□□□ -0.41
TMC3-202ENST00000558726 KIF2CQ99661 725 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms