RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 RTFDC1Q9BY42 306 aaPredicted RBP10.4□□□□□ -0.74
TRAF3-205ENST00000558700 MYH3P11055 1940 aa10.4□□□□□ -0.74
TRAF3-205ENST00000558700 PASKQ96RG2 1323 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 CDHR2Q9BYE9 1310 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 TRPM7Q96QT4 1865 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 ATP5J2-PTCD1G3V325 749 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 MAP3K13O43283 966 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 DDX58O95786 925 aaKnown RBP10.39□□□□□ -0.75
TRAF3-205ENST00000558700 HSP90B1P14625 803 aaKnown RBP10.39□□□□□ -0.75
TRAF3-205ENST00000558700 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 RIC3Q7Z5B4 369 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 MPNDQ8N594 471 aa10.39□□□□□ -0.75
TRAF3-205ENST00000558700 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-205ENST00000558700 SCNN1DP51172 638 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 KIAA2012Q0VF49 1180 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 TRIM28Q13263 835 aaKnown RBP10.38□□□□□ -0.75
TRAF3-205ENST00000558700 CCDC27Q2M243 656 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 FAM89AQ96GI7 184 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 ZNRF3Q9ULT6 936 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 CNTNAP1P78357 1384 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 COL4A1P02462 1669 aa10.38□□□□□ -0.75
TRAF3-205ENST00000558700 CACNA1FO60840 1977 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 THSD7BQ9C0I4 1608 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 IRS4O14654 1257 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 SF3B3Q15393 1217 aaKnown RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 ZBTB38Q8NAP3 1195 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 PHAXQ9H814 394 aaKnown RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
TRAF3-205ENST00000558700 SPEF2Q9C093 1822 aa10.37□□□□□ -0.75
TRAF3-205ENST00000558700 IL16Q14005 1332 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 ANP32CO43423 234 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 ZMYND10O75800 440 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-205ENST00000558700 HSPA1AP0DMV8 641 aaKnown RBP10.36□□□□□ -0.75
TRAF3-205ENST00000558700 HSPA1BP0DMV9 641 aaKnown RBP10.36□□□□□ -0.75
TRAF3-205ENST00000558700 RTL5Q5HYW3 569 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-205ENST00000558700 CIAPIN1Q6FI81 312 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 USP50Q70EL3 339 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-205ENST00000558700 C8orf58Q8NAV2 365 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 CCDC191Q8NCU4 936 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 MYD88Q99836 296 aa10.36□□□□□ -0.75
TRAF3-205ENST00000558700 ADARB2Q9NS39 739 aaKnown RBP10.36□□□□□ -0.75
TRAF3-205ENST00000558700 PSME4Q14997 1843 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
TRAF3-205ENST00000558700 EPS15P42566 896 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 CXCL9Q07325 125 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 NEXNQ0ZGT2 675 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 TNIP1Q15025 636 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 CCDC184Q52MB2 194 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 MAP1SQ66K74 1059 aaPredicted RBP10.35□□□□□ -0.75
TRAF3-205ENST00000558700 WWC1Q8IX03 1113 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 CNTROBQ8N137 903 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 CELF1Q92879 486 aaKnown RBP10.35□□□□□ -0.75
TRAF3-205ENST00000558700 TSR2Q969E8 191 aaKnown RBP10.35□□□□□ -0.75
TRAF3-205ENST00000558700 EYA3Q99504 573 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 METTL22Q9BUU2 404 aaPredicted RBP10.35□□□□□ -0.75
TRAF3-205ENST00000558700 CWC25Q9NXE8 425 aaPredicted RBP10.35□□□□□ -0.75
TRAF3-205ENST00000558700 GPRC5DQ9NZD1 345 aa10.35□□□□□ -0.75
TRAF3-205ENST00000558700 ZNF316A6NFI3 1004 aaPredicted RBP10.34□□□□□ -0.75
TRAF3-205ENST00000558700 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
TRAF3-205ENST00000558700 MFSD10Q14728 455 aa10.34□□□□□ -0.75
TRAF3-205ENST00000558700 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
TRAF3-205ENST00000558700 CCDC152Q4G0S7 254 aa10.34□□□□□ -0.75
TRAF3-205ENST00000558700 TSPYL6Q8N831 410 aa10.34□□□□□ -0.75
TRAF3-205ENST00000558700 BCL2L13Q9BXK5 485 aa10.34□□□□□ -0.75
TRAF3-205ENST00000558700 NSFL1CQ9UNZ2 370 aaKnown RBP10.34□□□□□ -0.75
TRAF3-205ENST00000558700 MAP3K2Q9Y2U5 619 aa10.34□□□□□ -0.75
TRAF3-205ENST00000558700 ARIH1Q9Y4X5 557 aaPredicted RBP10.34□□□□□ -0.75
TRAF3-205ENST00000558700 RASSF10A6NK89 507 aa10.33□□□□□ -0.76
TRAF3-205ENST00000558700 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
TRAF3-205ENST00000558700 PDE8AO60658 829 aa10.33□□□□□ -0.76
TRAF3-205ENST00000558700 RAD17O75943 681 aa10.33□□□□□ -0.76
TRAF3-205ENST00000558700 RPS8P62241 208 aaKnown RBP10.33□□□□□ -0.76
TRAF3-205ENST00000558700 WASHC4Q2M389 1173 aa10.33□□□□□ -0.76
TRAF3-205ENST00000558700 ABT1Q9ULW3 272 aaKnown RBP10.33□□□□□ -0.76
TRAF3-205ENST00000558700 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
TRAF3-205ENST00000558700 CTSWP56202 376 aa10.32□□□□□ -0.76
TRAF3-205ENST00000558700 GPSM2P81274 684 aa10.32□□□□□ -0.76
TRAF3-205ENST00000558700 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
TRAF3-205ENST00000558700 AIDAQ96BJ3 306 aa10.32□□□□□ -0.76
TRAF3-205ENST00000558700 ZNF609O15014 1411 aa10.32□□□□□ -0.76
TRAF3-205ENST00000558700 SCN9AQ15858 1988 aa10.32□□□□□ -0.76
TRAF3-205ENST00000558700 RTL9Q8NET4 1388 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 YDJCA8MPS7 323 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 ECE2O60344 883 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 UFL1O94874 794 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 RPS12P25398 132 aaKnown RBP10.31□□□□□ -0.76
TRAF3-205ENST00000558700 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 TBC1D16Q8TBP0 767 aa10.31□□□□□ -0.76
TRAF3-205ENST00000558700 CDC5LQ99459 802 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms