RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
RTF1-205ENST00000558298 GRAPLQ8TC17 118 aaPredicted RBP9.86□□□□□ -0.83
RTF1-205ENST00000558298 RPGRQ92834 1020 aaKnown RBP9.86□□□□□ -0.83
RTF1-205ENST00000558298 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 SRCIN1Q9C0H9 1055 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 VPS33BQ9H267 617 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 SCN4AP35499 1836 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 PSME4Q14997 1843 aa9.86□□□□□ -0.83
RTF1-205ENST00000558298 GLTPD2A6NH11 291 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 POTECB2RU33 542 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 F6X3S4 739 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 RABL6Q3YEC7 729 aaPredicted RBP9.85□□□□□ -0.83
RTF1-205ENST00000558298 C8orf34Q49A92 452 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 CCDC152Q4G0S7 254 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 HS1BP3Q53T59 392 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 INTS3Q68E01 1043 aaKnown RBP9.85□□□□□ -0.83
RTF1-205ENST00000558298 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.85□□□□□ -0.83
RTF1-205ENST00000558298 RTKN2Q8IZC4 609 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 ZNF526Q8TF50 670 aaPredicted RBP9.85□□□□□ -0.83
RTF1-205ENST00000558298 RTFDC1Q9BY42 306 aaPredicted RBP9.85□□□□□ -0.83
RTF1-205ENST00000558298 ATP6V0A2Q9Y487 856 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 CEP350Q5VT06 3117 aa9.85□□□□□ -0.83
RTF1-205ENST00000558298 SPEF2Q9C093 1822 aa9.84□□□□□ -0.83
RTF1-205ENST00000558298 ESPNB1AK53 854 aa9.84□□□□□ -0.83
RTF1-205ENST00000558298 PPEF1O14829 653 aaPredicted RBP9.84□□□□□ -0.83
RTF1-205ENST00000558298 HCLS1P14317 486 aaPredicted RBP9.84□□□□□ -0.83
RTF1-205ENST00000558298 ATF7IPQ6VMQ6 1270 aa9.84□□□□□ -0.83
RTF1-205ENST00000558298 DDX46Q7L014 1031 aaKnown RBP9.84□□□□□ -0.83
RTF1-205ENST00000558298 TTLL11Q8NHH1 800 aa9.84□□□□□ -0.83
RTF1-205ENST00000558298 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
RTF1-205ENST00000558298 ZNF609O15014 1411 aa9.83□□□□□ -0.84
RTF1-205ENST00000558298 TRIM27P14373 513 aa9.83□□□□□ -0.84
RTF1-205ENST00000558298 UBE3BQ7Z3V4 1068 aa9.83□□□□□ -0.84
RTF1-205ENST00000558298 SP8Q8IXZ3 490 aa9.83□□□□□ -0.84
RTF1-205ENST00000558298 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
RTF1-205ENST00000558298 CDC5LQ99459 802 aaKnown RBP9.83□□□□□ -0.84
RTF1-205ENST00000558298 BCL2L13Q9BXK5 485 aa9.83□□□□□ -0.84
RTF1-205ENST00000558298 NOB1Q9ULX3 412 aaKnown RBP9.83□□□□□ -0.84
RTF1-205ENST00000558298 HDAC5Q9UQL6 1122 aa9.83□□□□□ -0.84
RTF1-205ENST00000558298 ZNF646O15015 1829 aaPredicted RBP9.83□□□□□ -0.84
RTF1-205ENST00000558298 FZD9O00144 591 aa9.82□□□□□ -0.84
RTF1-205ENST00000558298 TOMM70O94826 608 aa9.82□□□□□ -0.84
RTF1-205ENST00000558298 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
RTF1-205ENST00000558298 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
RTF1-205ENST00000558298 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
RTF1-205ENST00000558298 RRAGDQ9NQL2 400 aaPredicted RBP9.82□□□□□ -0.84
RTF1-205ENST00000558298 ZNF277Q9NRM2 450 aaPredicted RBP9.82□□□□□ -0.84
RTF1-205ENST00000558298 CHMP5Q9NZZ3 219 aa9.82□□□□□ -0.84
RTF1-205ENST00000558298 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
RTF1-205ENST00000558298 ZNF541Q9H0D2 1346 aa9.82□□□□□ -0.84
RTF1-205ENST00000558298 RPS8P62241 208 aaKnown RBP9.81□□□□□ -0.84
RTF1-205ENST00000558298 FOXO4P98177 505 aa9.81□□□□□ -0.84
RTF1-205ENST00000558298 MTX1Q13505 466 aa9.81□□□□□ -0.84
RTF1-205ENST00000558298 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
RTF1-205ENST00000558298 RBM46Q8TBY0 533 aaKnown RBP9.81□□□□□ -0.84
RTF1-205ENST00000558298 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
RTF1-205ENST00000558298 KAZALD1Q96I82 304 aa9.81□□□□□ -0.84
RTF1-205ENST00000558298 CRBNQ96SW2 442 aa9.81□□□□□ -0.84
RTF1-205ENST00000558298 BSDC1Q9NW68 430 aaPredicted RBP9.81□□□□□ -0.84
RTF1-205ENST00000558298 BCAR3O75815 825 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 NBPF7P0C2Y1 421 aaPredicted RBP9.8□□□□□ -0.84
RTF1-205ENST00000558298 MCM5P33992 734 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 CCDC173Q0VFZ6 552 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 PDE3AQ14432 1141 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 SLC4A10Q6U841 1118 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 SMAP1Q8IYB5 467 aaPredicted RBP9.8□□□□□ -0.84
RTF1-205ENST00000558298 SUPT20HQ8NEM7 779 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 C9orf78Q9NZ63 289 aaPredicted RBP9.8□□□□□ -0.84
RTF1-205ENST00000558298 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
RTF1-205ENST00000558298 SCN9AQ15858 1988 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 ZBTB22O15209 634 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 GNAI3P08754 354 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 HSPA6P17066 643 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 MCM4P33991 863 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 TAF3Q5VWG9 929 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 ANKRD18AQ8IVF6 992 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 GBP4Q96PP9 640 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
RTF1-205ENST00000558298 GREM2Q9H772 168 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 ARAP2Q8WZ64 1704 aa9.79□□□□□ -0.84
RTF1-205ENST00000558298 MED23Q9ULK4 1368 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 DDNO94850 711 aaPredicted RBP9.78□□□□□ -0.84
RTF1-205ENST00000558298 XRCC6P12956 609 aaKnown RBP eCLIP9.78□□□□□ -0.84
RTF1-205ENST00000558298 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
RTF1-205ENST00000558298 ITGA6P23229 1130 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 FSTL1Q12841 308 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 IFIT5Q13325 482 aaKnown RBP9.78□□□□□ -0.84
RTF1-205ENST00000558298 ANKRD44Q8N8A2 993 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 SUCLG2Q96I99 432 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 XDHP47989 1333 aa9.78□□□□□ -0.84
RTF1-205ENST00000558298 ANKRD18BA2A2Z9 1011 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 GOLGA6L22H0YM25 854 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 UBTFL1P0CB47 393 aaPredicted RBP9.77□□□□□ -0.85
RTF1-205ENST00000558298 IGHMBP2P38935 993 aaKnown RBP9.77□□□□□ -0.85
RTF1-205ENST00000558298 EPHA10Q5JZY3 1008 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 C15orf52Q6ZUT6 534 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms