RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 BSDC1Q9NW68 430 aaPredicted RBP14.3□□□□□ -0.12
RORA-207ENST00000558234 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
RORA-207ENST00000558234 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
RORA-207ENST00000558234 C2CD5Q86YS7 1000 aa14.3□□□□□ -0.12
RORA-207ENST00000558234 MYH7P12883 1935 aa14.29□□□□□ -0.12
RORA-207ENST00000558234 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
RORA-207ENST00000558234 FGFR2P21802 821 aa14.29□□□□□ -0.12
RORA-207ENST00000558234 C15orf52Q6ZUT6 534 aaKnown RBP14.29□□□□□ -0.12
RORA-207ENST00000558234 TMC4Q7Z404 712 aa14.29□□□□□ -0.12
RORA-207ENST00000558234 FOCADQ5VW36 1801 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 PRELPP51888 382 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 RBM17Q96I25 401 aaKnown RBP14.28□□□□□ -0.12
RORA-207ENST00000558234 ATP6V0A2Q9Y487 856 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 ADAMTSL1Q8N6G6 1762 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 CHD1LQ86WJ1 897 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 HDAC5Q9UQL6 1122 aa14.28□□□□□ -0.12
RORA-207ENST00000558234 RTL5Q5HYW3 569 aaPredicted RBP14.28□□□□□ -0.12
RORA-207ENST00000558234 PRPF40BQ6NWY9 871 aaKnown RBP14.27□□□□□ -0.12
RORA-207ENST00000558234 SP8Q8IXZ3 490 aa14.27□□□□□ -0.12
RORA-207ENST00000558234 BBOX1O75936 387 aa14.27□□□□□ -0.13
RORA-207ENST00000558234 CDK5RAP2Q96SN8 1893 aa14.27□□□□□ -0.13
RORA-207ENST00000558234 SASH1O94885 1247 aa14.27□□□□□ -0.13
RORA-207ENST00000558234 COL1A1P02452 1464 aaPredicted RBP14.26□□□□□ -0.13
RORA-207ENST00000558234 H0YIN7 160 aa14.26□□□□□ -0.13
RORA-207ENST00000558234 YBX3P16989 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
RORA-207ENST00000558234 PUS3Q9BZE2 481 aaKnown RBP14.26□□□□□ -0.13
RORA-207ENST00000558234 OSBPL3Q9H4L5 887 aa14.26□□□□□ -0.13
RORA-207ENST00000558234 WDR90Q96KV7 1748 aa14.26□□□□□ -0.13
RORA-207ENST00000558234 MINPP1Q9UNW1 487 aa14.26□□□□□ -0.13
RORA-207ENST00000558234 KLHDC4Q8TBB5 520 aa14.25□□□□□ -0.13
RORA-207ENST00000558234 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
RORA-207ENST00000558234 ALDH1B1P30837 517 aa14.25□□□□□ -0.13
RORA-207ENST00000558234 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
RORA-207ENST00000558234 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
RORA-207ENST00000558234 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
RORA-207ENST00000558234 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
RORA-207ENST00000558234 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
RORA-207ENST00000558234 DDX60LQ5H9U9 1706 aaKnown RBP14.25□□□□□ -0.13
RORA-207ENST00000558234 ANKRD18BA2A2Z9 1011 aa14.24□□□□□ -0.13
RORA-207ENST00000558234 EYA2O00167 538 aa14.24□□□□□ -0.13
RORA-207ENST00000558234 SRGAP3O43295 1099 aa14.24□□□□□ -0.13
RORA-207ENST00000558234 PSMD1Q99460 953 aa14.24□□□□□ -0.13
RORA-207ENST00000558234 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
RORA-207ENST00000558234 IFIT5Q13325 482 aaKnown RBP14.24□□□□□ -0.13
RORA-207ENST00000558234 MROH5Q6ZUA9 1318 aa14.24□□□□□ -0.13
RORA-207ENST00000558234 NFKBIEO00221 500 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 PA2G4Q9UQ80 394 aaKnown RBP14.23□□□□□ -0.13
RORA-207ENST00000558234 MED23Q9ULK4 1368 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 GRIPAP1Q4V328 841 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 TTLL6Q8N841 843 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 ZNF804BA4D1E1 1349 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
RORA-207ENST00000558234 WTIPA6NIX2 430 aaPredicted RBP14.22□□□□□ -0.13
RORA-207ENST00000558234 GPSM2P81274 684 aa14.22□□□□□ -0.13
RORA-207ENST00000558234 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
RORA-207ENST00000558234 DDX46Q7L014 1031 aaKnown RBP14.22□□□□□ -0.13
RORA-207ENST00000558234 RPGRQ92834 1020 aaKnown RBP14.22□□□□□ -0.13
RORA-207ENST00000558234 VPS33BQ9H267 617 aa14.22□□□□□ -0.13
RORA-207ENST00000558234 GSPT1P15170 499 aaKnown RBP14.21□□□□□ -0.13
RORA-207ENST00000558234 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.13
RORA-207ENST00000558234 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
RORA-207ENST00000558234 CHRNDQ07001 517 aa14.21□□□□□ -0.13
RORA-207ENST00000558234 CCDC57Q2TAC2 916 aa14.21□□□□□ -0.14
RORA-207ENST00000558234 CC2D2BQ6DHV5 1058 aa14.21□□□□□ -0.14
RORA-207ENST00000558234 STAP2Q9UGK3 403 aa14.21□□□□□ -0.14
RORA-207ENST00000558234 IL15P40933 162 aaPredicted RBP14.2□□□□□ -0.14
RORA-207ENST00000558234 BMP2KLQ5H9B9 411 aa14.2□□□□□ -0.14
RORA-207ENST00000558234 PAPPA2Q9BXP8 1791 aa14.2□□□□□ -0.14
RORA-207ENST00000558234 SCN4AP35499 1836 aa14.2□□□□□ -0.14
RORA-207ENST00000558234 PDE8BO95263 885 aa14.2□□□□□ -0.14
RORA-207ENST00000558234 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
RORA-207ENST00000558234 SEC24BO95487 1268 aa14.19□□□□□ -0.14
RORA-207ENST00000558234 TBC1D16Q8TBP0 767 aa14.19□□□□□ -0.14
RORA-207ENST00000558234 XDHP47989 1333 aa14.19□□□□□ -0.14
RORA-207ENST00000558234 RAB11FIP3O75154 756 aa14.19□□□□□ -0.14
RORA-207ENST00000558234 GTF2E1P29083 439 aaPredicted RBP14.19□□□□□ -0.14
RORA-207ENST00000558234 CCDC85AQ96PX6 553 aaPredicted RBP14.19□□□□□ -0.14
RORA-207ENST00000558234 C16orf71Q8IYS4 520 aaPredicted RBP14.19□□□□□ -0.14
RORA-207ENST00000558234 ZNF512BQ96KM6 892 aaPredicted RBP14.18□□□□□ -0.14
RORA-207ENST00000558234 KLRK1P26718 216 aa14.18□□□□□ -0.14
RORA-207ENST00000558234 OTUD7AQ8TE49 926 aaPredicted RBP14.18□□□□□ -0.14
RORA-207ENST00000558234 PDS5AQ29RF7 1337 aaKnown RBP14.18□□□□□ -0.14
RORA-207ENST00000558234 FKBP4Q02790 459 aaKnown RBP eCLIP14.18□□□□□ -0.14
RORA-207ENST00000558234 SOGA3Q5TF21 947 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 LAMB1P07942 1786 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 LEMD3Q9Y2U8 911 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 TFCP2Q12800 502 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 UBE4AQ14139 1066 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 AOX1Q06278 1338 aa14.17□□□□□ -0.14
RORA-207ENST00000558234 IGHMBP2P38935 993 aaKnown RBP14.16□□□□□ -0.14
RORA-207ENST00000558234 FBXO33Q7Z6M2 555 aa14.16□□□□□ -0.14
RORA-207ENST00000558234 CCDC93Q567U6 631 aa14.16□□□□□ -0.14
RORA-207ENST00000558234 ANKRD45Q5TZF3 282 aa14.16□□□□□ -0.14
RORA-207ENST00000558234 LDHAL6AQ6ZMR3 332 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms