RNA–Protein interactions for RNA: ENST00000557998.5

RNF111-202, Transcript of ring finger protein 111, humanhuman

TSL 2 BASIC

Gene RNF111, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-202ENST00000557998 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 PCCAP05165 728 aaPredicted RBP12.73□□□□□ -0.37
RNF111-202ENST00000557998 PARP10Q53GL7 1025 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 CCDC183Q5T5S1 534 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 XAGE2Q96GT9 111 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 UBAC1Q9BSL1 405 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
RNF111-202ENST00000557998 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
RNF111-202ENST00000557998 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
RNF111-202ENST00000557998 NUP62CLQ9H1M0 184 aa12.73□□□□□ -0.37
RNF111-202ENST00000557998 DBNLQ9UJU6 430 aaKnown RBP12.73□□□□□ -0.37
RNF111-202ENST00000557998 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
RNF111-202ENST00000557998 PTH1RQ03431 593 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 ZBTB38Q8NAP3 1195 aaPredicted RBP12.72□□□□□ -0.37
RNF111-202ENST00000557998 RASSF8Q8NHQ8 419 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 F13A1P00488 732 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 MCM5P33992 734 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
RNF111-202ENST00000557998 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 FAM43AQ8N2R8 423 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 A0A0D9SFI3 127 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 GOLGA8BA8MQT2 603 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 PIGBQ92521 554 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 KIF2CQ99661 725 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
RNF111-202ENST00000557998 CCDC39Q9UFE4 941 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 UBE2HP62256 183 aa12.72□□□□□ -0.37
RNF111-202ENST00000557998 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.37
RNF111-202ENST00000557998 SYT1P21579 422 aa12.71□□□□□ -0.37
RNF111-202ENST00000557998 RPS6KB1P23443 525 aa12.71□□□□□ -0.37
RNF111-202ENST00000557998 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
RNF111-202ENST00000557998 CPDO75976 1380 aa12.71□□□□□ -0.37
RNF111-202ENST00000557998 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
RNF111-202ENST00000557998 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
RNF111-202ENST00000557998 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
RNF111-202ENST00000557998 JMYQ8N9B5 988 aa12.71□□□□□ -0.37
RNF111-202ENST00000557998 LTN1O94822 1766 aa12.71□□□□□ -0.37
RNF111-202ENST00000557998 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.38
RNF111-202ENST00000557998 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 HAUS7Q99871 368 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 HOOK1Q9UJC3 728 aaKnown RBP12.71□□□□□ -0.38
RNF111-202ENST00000557998 FBXO3Q9UK99 471 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 MEGF6O75095 1541 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 C8orf76Q96K31 380 aa12.71□□□□□ -0.38
RNF111-202ENST00000557998 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF111-202ENST00000557998 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 USP48Q86UV5 1035 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 SETDB2Q96T68 719 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 H7C1W4 665 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 PDIA6Q15084 440 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 GPR108Q9NPR9 543 aa12.7□□□□□ -0.38
RNF111-202ENST00000557998 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
RNF111-202ENST00000557998 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
RNF111-202ENST00000557998 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
RNF111-202ENST00000557998 AK7Q96M32 723 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 SLIT3O75094 1523 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 CTSWP56202 376 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
RNF111-202ENST00000557998 RFC4P35249 363 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
RNF111-202ENST00000557998 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
RNF111-202ENST00000557998 ZBTB1Q9Y2K1 713 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 CIAO1O76071 339 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 WASF1Q92558 559 aa12.69□□□□□ -0.38
RNF111-202ENST00000557998 IFIT3O14879 490 aaKnown RBP12.68□□□□□ -0.38
RNF111-202ENST00000557998 APPBP2Q92624 585 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 MAP4K1Q92918 833 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
RNF111-202ENST00000557998 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 IL6STP40189 918 aaPredicted RBP12.68□□□□□ -0.38
RNF111-202ENST00000557998 KDM6AO15550 1401 aaPredicted RBP12.68□□□□□ -0.38
RNF111-202ENST00000557998 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 BRD1O95696 1058 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
RNF111-202ENST00000557998 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
RNF111-202ENST00000557998 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
RNF111-202ENST00000557998 ESPNB1AK53 854 aa12.67□□□□□ -0.38
RNF111-202ENST00000557998 NBPF26B4DH59 902 aa12.67□□□□□ -0.38
RNF111-202ENST00000557998 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
RNF111-202ENST00000557998 NBPF10Q6P3W6 841 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms