RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 TGFB2P61812 414 aa12.85□□□□□ -0.35
GABRB3-213ENST00000557765 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-213ENST00000557765 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
GABRB3-213ENST00000557765 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
GABRB3-213ENST00000557765 MASTLQ96GX5 879 aa12.85□□□□□ -0.35
GABRB3-213ENST00000557765 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
GABRB3-213ENST00000557765 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 H0YIN7 160 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 SEMA3EO15041 775 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 IFIT1P09914 478 aaKnown RBP12.84□□□□□ -0.35
GABRB3-213ENST00000557765 UQCRFS1P1P0C7P4 283 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 ATP5JP18859 108 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 DDR1Q08345 913 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
GABRB3-213ENST00000557765 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
GABRB3-213ENST00000557765 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
GABRB3-213ENST00000557765 ZNF609O15014 1411 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 SRGNP10124 158 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 SLC5A1P13866 664 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 TTC22Q5TAA0 569 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 AACSQ86V21 672 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 CNTROBQ8N137 903 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 GNL3LQ9NVN8 582 aaKnown RBP12.83□□□□□ -0.36
GABRB3-213ENST00000557765 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
GABRB3-213ENST00000557765 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
GABRB3-213ENST00000557765 CASZ1Q86V15 1759 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 TFCP2Q12800 502 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 TTF1Q15361 905 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-213ENST00000557765 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 SIL1Q9H173 461 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
GABRB3-213ENST00000557765 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 XDHP47989 1333 aa12.82□□□□□ -0.36
GABRB3-213ENST00000557765 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 FGFR2P21802 821 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 PDE4AP27815 886 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 RGS3P49796 1198 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 CAVIN4Q5BKX8 364 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 SYNE4Q8N205 404 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-213ENST00000557765 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
GABRB3-213ENST00000557765 ATP2B4P23634 1241 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 LRRC24Q50LG9 513 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 GORABQ5T7V8 394 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 RUFY2Q8WXA3 655 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
GABRB3-213ENST00000557765 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 MINPP1Q9UNW1 487 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
GABRB3-213ENST00000557765 ARAP2Q8WZ64 1704 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 CDC45O75419 566 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
GABRB3-213ENST00000557765 CHRNDQ07001 517 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
GABRB3-213ENST00000557765 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-213ENST00000557765 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
GABRB3-213ENST00000557765 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
GABRB3-213ENST00000557765 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
GABRB3-213ENST00000557765 HAUS7Q99871 368 aa12.78□□□□□ -0.36
GABRB3-213ENST00000557765 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
GABRB3-213ENST00000557765 RAD50Q92878 1312 aa12.78□□□□□ -0.36
GABRB3-213ENST00000557765 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
GABRB3-213ENST00000557765 APBB1O00213 710 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 REC8O95072 547 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 KCNJ4P48050 445 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
GABRB3-213ENST00000557765 XAGE2Q96GT9 111 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-213ENST00000557765 NEUROD6Q96NK8 337 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 EYA3Q99504 573 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 BACH2Q9BYV9 841 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.37
GABRB3-213ENST00000557765 SEC31BQ9NQW1 1179 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
GABRB3-213ENST00000557765 DLEC1Q9Y238 1755 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 PPEF1O14829 653 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-213ENST00000557765 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-213ENST00000557765 MMP14P50281 582 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
GABRB3-213ENST00000557765 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
GABRB3-213ENST00000557765 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 MED23Q9ULK4 1368 aa12.76□□□□□ -0.37
GABRB3-213ENST00000557765 SMIM5Q71RC9 77 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 ZNF804AQ7Z570 1209 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 VPS37DQ86XT2 251 aa12.75□□□□□ -0.37
GABRB3-213ENST00000557765 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
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