RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
SLIRP-211ENST00000557623 COL4A1P02462 1669 aa15.78■□□□□ 0.12
SLIRP-211ENST00000557623 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
SLIRP-211ENST00000557623 CSF1RP07333 972 aa15.77■□□□□ 0.12
SLIRP-211ENST00000557623 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
SLIRP-211ENST00000557623 ARHGAP45Q92619 1136 aa15.77■□□□□ 0.12
SLIRP-211ENST00000557623 GREM2Q9H772 168 aa15.77■□□□□ 0.12
SLIRP-211ENST00000557623 LTBP1Q14766 1721 aa15.77■□□□□ 0.11
SLIRP-211ENST00000557623 UTYO14607 1347 aa15.76■□□□□ 0.11
SLIRP-211ENST00000557623 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
SLIRP-211ENST00000557623 CCT4P50991 539 aaKnown RBP15.76■□□□□ 0.11
SLIRP-211ENST00000557623 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
SLIRP-211ENST00000557623 WDR90Q96KV7 1748 aa15.76■□□□□ 0.11
SLIRP-211ENST00000557623 PPIP5K2O43314 1243 aa15.75■□□□□ 0.11
SLIRP-211ENST00000557623 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
SLIRP-211ENST00000557623 FOXO4P98177 505 aa15.75■□□□□ 0.11
SLIRP-211ENST00000557623 SLC51AQ86UW1 340 aa15.75■□□□□ 0.11
SLIRP-211ENST00000557623 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
SLIRP-211ENST00000557623 DUOX1Q9NRD9 1551 aa15.75■□□□□ 0.11
SLIRP-211ENST00000557623 SCN4AP35499 1836 aa15.74■□□□□ 0.11
SLIRP-211ENST00000557623 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
SLIRP-211ENST00000557623 ITGA6P23229 1130 aa15.74■□□□□ 0.11
SLIRP-211ENST00000557623 EVX2Q03828 476 aa15.74■□□□□ 0.11
SLIRP-211ENST00000557623 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
SLIRP-211ENST00000557623 NIM1KQ8IY84 436 aa15.74■□□□□ 0.11
SLIRP-211ENST00000557623 BSDC1Q9NW68 430 aaPredicted RBP15.74■□□□□ 0.11
SLIRP-211ENST00000557623 FZD9O00144 591 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 NBPF7P0C2Y1 421 aaPredicted RBP15.73■□□□□ 0.11
SLIRP-211ENST00000557623 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
SLIRP-211ENST00000557623 GPSM2P81274 684 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 KIAA2012Q0VF49 1180 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 IFIT5Q13325 482 aaKnown RBP15.73■□□□□ 0.11
SLIRP-211ENST00000557623 AOC3Q16853 763 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 EYA3Q99504 573 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 NMRK2Q9NPI5 230 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 ANKIB1Q9P2G1 1089 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 CHMP3Q9Y3E7 222 aa15.73■□□□□ 0.11
SLIRP-211ENST00000557623 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 KIF3CO14782 793 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 BCAR3O75815 825 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 NUBP1P53384 320 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 LMBR1LQ6UX01 489 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 TSPYL2Q9H2G4 693 aaPredicted RBP15.72■□□□□ 0.11
SLIRP-211ENST00000557623 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 HDAC5Q9UQL6 1122 aa15.72■□□□□ 0.11
SLIRP-211ENST00000557623 XDHP47989 1333 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 COL4A5P29400 1685 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
SLIRP-211ENST00000557623 WASHC4Q2M389 1173 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 CCDC57Q2TAC2 916 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 C16orf71Q8IYS4 520 aaPredicted RBP15.71■□□□□ 0.11
SLIRP-211ENST00000557623 RASEFQ8IZ41 740 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.11
SLIRP-211ENST00000557623 SUCLG2Q96I99 432 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 A0A1B0GUL6 1792 aa15.71■□□□□ 0.11
SLIRP-211ENST00000557623 DDNO94850 711 aaPredicted RBP15.7■□□□□ 0.1
SLIRP-211ENST00000557623 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 TAF7LQ5H9L4 462 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 ZKSCAN2Q63HK3 967 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 ZNRF3Q9ULT6 936 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 MINPP1Q9UNW1 487 aa15.7■□□□□ 0.1
SLIRP-211ENST00000557623 ZNF541Q9H0D2 1346 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 UFL1O94874 794 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 TRIM27P14373 513 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 INTS3Q68E01 1043 aaKnown RBP15.69■□□□□ 0.1
SLIRP-211ENST00000557623 GPC2Q8N158 579 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
SLIRP-211ENST00000557623 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 KAZALD1Q96I82 304 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 ZC3H12CQ9C0D7 883 aaKnown RBP15.69■□□□□ 0.1
SLIRP-211ENST00000557623 ANKRD2Q9GZV1 360 aa15.69■□□□□ 0.1
SLIRP-211ENST00000557623 BICC1Q9H694 974 aaKnown RBP15.69■□□□□ 0.1
SLIRP-211ENST00000557623 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
SLIRP-211ENST00000557623 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
SLIRP-211ENST00000557623 TOMM70O94826 608 aa15.68■□□□□ 0.1
SLIRP-211ENST00000557623 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
SLIRP-211ENST00000557623 C1QTNF8P60827 252 aa15.68■□□□□ 0.1
SLIRP-211ENST00000557623 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
SLIRP-211ENST00000557623 L3MBTL3Q96JM7 780 aaPredicted RBP15.68■□□□□ 0.1
SLIRP-211ENST00000557623 PSME4Q14997 1843 aa15.67■□□□□ 0.1
SLIRP-211ENST00000557623 G3V3G9 751 aa15.67■□□□□ 0.1
SLIRP-211ENST00000557623 DCAF8Q5TAQ9 597 aa15.67■□□□□ 0.1
SLIRP-211ENST00000557623 LEMD3Q9Y2U8 911 aa15.67■□□□□ 0.1
SLIRP-211ENST00000557623 GNAI3P08754 354 aa15.66■□□□□ 0.1
SLIRP-211ENST00000557623 TNIP1Q15025 636 aa15.66■□□□□ 0.1
SLIRP-211ENST00000557623 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
SLIRP-211ENST00000557623 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
SLIRP-211ENST00000557623 GJA3Q9Y6H8 435 aa15.66■□□□□ 0.1
SLIRP-211ENST00000557623 MED23Q9ULK4 1368 aa15.65■□□□□ 0.1
SLIRP-211ENST00000557623 POTECB2RU33 542 aa15.65■□□□□ 0.1
SLIRP-211ENST00000557623 CHRNDQ07001 517 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms