RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
PRKCH-227ENST00000557599 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
PRKCH-227ENST00000557599 EPHX2P34913 555 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 SCNN1DP51172 638 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
PRKCH-227ENST00000557599 PPP1R42Q7Z4L9 355 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 C1orf115Q9H7X2 142 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
PRKCH-227ENST00000557599 IGKV5-2P06315 115 aa13.1□□□□□ -0.31
PRKCH-227ENST00000557599 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
PRKCH-227ENST00000557599 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
PRKCH-227ENST00000557599 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
PRKCH-227ENST00000557599 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
PRKCH-227ENST00000557599 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
PRKCH-227ENST00000557599 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
PRKCH-227ENST00000557599 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
PRKCH-227ENST00000557599 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
PRKCH-227ENST00000557599 GCC1Q96CN9 775 aa13.09□□□□□ -0.31
PRKCH-227ENST00000557599 NLRP3Q96P20 1036 aa13.09□□□□□ -0.31
PRKCH-227ENST00000557599 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
PRKCH-227ENST00000557599 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
PRKCH-227ENST00000557599 UTYO14607 1347 aa13.09□□□□□ -0.31
PRKCH-227ENST00000557599 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
PRKCH-227ENST00000557599 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
PRKCH-227ENST00000557599 UBE3BQ7Z3V4 1068 aa13.08□□□□□ -0.32
PRKCH-227ENST00000557599 ZNF646O15015 1829 aaPredicted RBP13.08□□□□□ -0.32
PRKCH-227ENST00000557599 PSME4Q14997 1843 aa13.08□□□□□ -0.32
PRKCH-227ENST00000557599 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
PRKCH-227ENST00000557599 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
PRKCH-227ENST00000557599 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
PRKCH-227ENST00000557599 HSP90AB4PQ58FF6 505 aa13.07□□□□□ -0.32
PRKCH-227ENST00000557599 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
PRKCH-227ENST00000557599 JDP2Q8WYK2 163 aa13.07□□□□□ -0.32
PRKCH-227ENST00000557599 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
PRKCH-227ENST00000557599 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
PRKCH-227ENST00000557599 BBOX1O75936 387 aa13.06□□□□□ -0.32
PRKCH-227ENST00000557599 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
PRKCH-227ENST00000557599 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
PRKCH-227ENST00000557599 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
PRKCH-227ENST00000557599 H7C1W4 665 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 SRGAP3O43295 1099 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
PRKCH-227ENST00000557599 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 GRAPQ13588 217 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
PRKCH-227ENST00000557599 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
PRKCH-227ENST00000557599 ZNF609O15014 1411 aa13.05□□□□□ -0.32
PRKCH-227ENST00000557599 IGHDP01880 384 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 EPS15P42566 896 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 OS9Q13438 667 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-227ENST00000557599 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
PRKCH-227ENST00000557599 AOC3Q16853 763 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-227ENST00000557599 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-227ENST00000557599 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-227ENST00000557599 TMC4Q7Z404 712 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 CHMP3Q9Y3E7 222 aa13.04□□□□□ -0.32
PRKCH-227ENST00000557599 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
PRKCH-227ENST00000557599 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
PRKCH-227ENST00000557599 VEGFBP49765 207 aa13.03□□□□□ -0.32
PRKCH-227ENST00000557599 CXCL9Q07325 125 aa13.03□□□□□ -0.32
PRKCH-227ENST00000557599 MTX1Q13505 466 aa13.03□□□□□ -0.32
PRKCH-227ENST00000557599 BICC1Q9H694 974 aaKnown RBP13.03□□□□□ -0.32
PRKCH-227ENST00000557599 ZNRF3Q9ULT6 936 aa13.03□□□□□ -0.32
PRKCH-227ENST00000557599 SCN9AQ15858 1988 aa13.03□□□□□ -0.32
PRKCH-227ENST00000557599 IRS4O14654 1257 aaPredicted RBP13.02□□□□□ -0.33
PRKCH-227ENST00000557599 RAB11FIP3O75154 756 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
PRKCH-227ENST00000557599 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 SUPT20HQ8NEM7 779 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 SSH3Q8TE77 659 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
PRKCH-227ENST00000557599 YDJCA8MPS7 323 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 FOXN1O15353 648 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 PDE8AO60658 829 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 G3BP1Q13283 466 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRKCH-227ENST00000557599 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 PLA2G12BQ9BX93 195 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 ADARB2Q9NS39 739 aaKnown RBP13.01□□□□□ -0.33
PRKCH-227ENST00000557599 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 MYH3P11055 1940 aa13.01□□□□□ -0.33
PRKCH-227ENST00000557599 PNMA6EA0A0J9YXQ4 647 aa13□□□□□ -0.33
PRKCH-227ENST00000557599 SURF6O75683 361 aaKnown RBP13□□□□□ -0.33
PRKCH-227ENST00000557599 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms