RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 PAPPA2Q9BXP8 1791 aa23.99■■□□□ 1.43
ABCD4-228ENST00000557588 SULF1Q8IWU6 871 aa23.99■■□□□ 1.43
ABCD4-228ENST00000557588 FAM89AQ96GI7 184 aa23.99■■□□□ 1.43
ABCD4-228ENST00000557588 TRPA1O75762 1119 aa23.98■■□□□ 1.43
ABCD4-228ENST00000557588 TMPOP42166 694 aaKnown RBP23.98■■□□□ 1.43
ABCD4-228ENST00000557588 SOX10P56693 466 aa23.98■■□□□ 1.43
ABCD4-228ENST00000557588 DOK7Q18PE1 504 aa23.98■■□□□ 1.43
ABCD4-228ENST00000557588 KRT24Q2M2I5 525 aa23.98■■□□□ 1.43
ABCD4-228ENST00000557588 RBM26Q5T8P6 1007 aaKnown RBP23.98■■□□□ 1.43
ABCD4-228ENST00000557588 TBC1D16Q8TBP0 767 aa23.98■■□□□ 1.43
ABCD4-228ENST00000557588 ZNF428Q96B54 188 aa23.98■■□□□ 1.43
ABCD4-228ENST00000557588 VIL1P09327 827 aaKnown RBP23.97■■□□□ 1.43
ABCD4-228ENST00000557588 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
ABCD4-228ENST00000557588 CSRNP1Q96S65 589 aa23.97■■□□□ 1.43
ABCD4-228ENST00000557588 ASTN2O75129 1339 aaPredicted RBP23.96■■□□□ 1.43
ABCD4-228ENST00000557588 CHL1O00533 1208 aa23.96■■□□□ 1.43
ABCD4-228ENST00000557588 HOXB7P09629 217 aa23.96■■□□□ 1.43
ABCD4-228ENST00000557588 REM2Q8IYK8 340 aaPredicted RBP23.96■■□□□ 1.43
ABCD4-228ENST00000557588 PODXL2Q9NZ53 605 aa23.96■■□□□ 1.43
ABCD4-228ENST00000557588 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.42
ABCD4-228ENST00000557588 CTU1Q7Z7A3 348 aaKnown RBP23.95■■□□□ 1.42
ABCD4-228ENST00000557588 RASAL3Q86YV0 1011 aa23.95■■□□□ 1.42
ABCD4-228ENST00000557588 ATP5J2-PTCD1G3V325 749 aa23.94■■□□□ 1.42
ABCD4-228ENST00000557588 ZNF280AP59817 542 aaPredicted RBP23.94■■□□□ 1.42
ABCD4-228ENST00000557588 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
ABCD4-228ENST00000557588 IRS4O14654 1257 aaPredicted RBP23.93■■□□□ 1.42
ABCD4-228ENST00000557588 RPS8P62241 208 aaKnown RBP23.93■■□□□ 1.42
ABCD4-228ENST00000557588 FKBP1BP68106 108 aa23.93■■□□□ 1.42
ABCD4-228ENST00000557588 TRIM28Q13263 835 aaKnown RBP23.93■■□□□ 1.42
ABCD4-228ENST00000557588 ZC3H12CQ9C0D7 883 aaKnown RBP23.93■■□□□ 1.42
ABCD4-228ENST00000557588 DBF4Q9UBU7 674 aaPredicted RBP23.93■■□□□ 1.42
ABCD4-228ENST00000557588 UFL1O94874 794 aa23.91■■□□□ 1.42
ABCD4-228ENST00000557588 ANGEL2Q5VTE6 544 aaKnown RBP23.91■■□□□ 1.42
ABCD4-228ENST00000557588 PRPF38BQ5VTL8 546 aaKnown RBP23.91■■□□□ 1.42
ABCD4-228ENST00000557588 AGBL3Q8NEM8 1001 aa23.91■■□□□ 1.42
ABCD4-228ENST00000557588 PITPNM2Q9BZ72 1349 aa23.9■■□□□ 1.42
ABCD4-228ENST00000557588 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
ABCD4-228ENST00000557588 RSBN1LQ6PCB5 846 aaPredicted RBP23.9■■□□□ 1.42
ABCD4-228ENST00000557588 SCARF1Q14162 830 aa23.89■■□□□ 1.41
ABCD4-228ENST00000557588 HYPKQ9NX55 129 aa23.89■■□□□ 1.41
ABCD4-228ENST00000557588 GGA1Q9UJY5 639 aa23.89■■□□□ 1.41
ABCD4-228ENST00000557588 ZBTB38Q8NAP3 1195 aaPredicted RBP23.88■■□□□ 1.41
ABCD4-228ENST00000557588 GMLQ99445 158 aa23.88■■□□□ 1.41
ABCD4-228ENST00000557588 ANKIB1Q9P2G1 1089 aa23.88■■□□□ 1.41
ABCD4-228ENST00000557588 HPS5Q9UPZ3 1129 aa23.88■■□□□ 1.41
ABCD4-228ENST00000557588 ZNF646O15015 1829 aaPredicted RBP23.88■■□□□ 1.41
ABCD4-228ENST00000557588 SEC31BQ9NQW1 1179 aa23.87■■□□□ 1.41
ABCD4-228ENST00000557588 TRIM35Q9UPQ4 493 aa23.87■■□□□ 1.41
ABCD4-228ENST00000557588 G3V3G9 751 aa23.86■■□□□ 1.41
ABCD4-228ENST00000557588 HSP90B1P14625 803 aaKnown RBP23.86■■□□□ 1.41
ABCD4-228ENST00000557588 PKN2Q16513 984 aaKnown RBP23.86■■□□□ 1.41
ABCD4-228ENST00000557588 DCAF8Q5TAQ9 597 aa23.86■■□□□ 1.41
ABCD4-228ENST00000557588 MYOZ2Q9NPC6 264 aa23.86■■□□□ 1.41
ABCD4-228ENST00000557588 USP17L8P0C7I0 530 aa23.85■■□□□ 1.41
ABCD4-228ENST00000557588 NEUROD2Q15784 382 aa23.85■■□□□ 1.41
ABCD4-228ENST00000557588 LAS1LQ9Y4W2 734 aaKnown RBP23.85■■□□□ 1.41
ABCD4-228ENST00000557588 XDHP47989 1333 aa23.84■■□□□ 1.41
ABCD4-228ENST00000557588 RALBP1Q15311 655 aa23.83■■□□□ 1.41
ABCD4-228ENST00000557588 CCDC152Q4G0S7 254 aa23.83■■□□□ 1.41
ABCD4-228ENST00000557588 CCDC146Q8IYE0 955 aa23.83■■□□□ 1.41
ABCD4-228ENST00000557588 GOLGA2Q08379 1002 aa23.82■■□□□ 1.4
ABCD4-228ENST00000557588 NOM1Q5C9Z4 860 aaKnown RBP23.82■■□□□ 1.4
ABCD4-228ENST00000557588 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
ABCD4-228ENST00000557588 ZNF296Q8WUU4 475 aaPredicted RBP23.82■■□□□ 1.4
ABCD4-228ENST00000557588 USP17L3A6NCW0 530 aa23.81■■□□□ 1.4
ABCD4-228ENST00000557588 USP17L4A6NCW7 530 aa23.81■■□□□ 1.4
ABCD4-228ENST00000557588 PCCAP05165 728 aaPredicted RBP23.81■■□□□ 1.4
ABCD4-228ENST00000557588 MOB2Q70IA6 237 aa23.81■■□□□ 1.4
ABCD4-228ENST00000557588 USP17L1Q7RTZ2 530 aa23.81■■□□□ 1.4
ABCD4-228ENST00000557588 RIC3Q7Z5B4 369 aa23.81■■□□□ 1.4
ABCD4-228ENST00000557588 PODNQ7Z5L7 613 aa23.81■■□□□ 1.4
ABCD4-228ENST00000557588 CCDC191Q8NCU4 936 aa23.8■■□□□ 1.4
ABCD4-228ENST00000557588 RUNDC1Q96C34 613 aa23.8■■□□□ 1.4
ABCD4-228ENST00000557588 HDAC9Q9UKV0 1011 aa23.8■■□□□ 1.4
ABCD4-228ENST00000557588 MED23Q9ULK4 1368 aa23.79■■□□□ 1.4
ABCD4-228ENST00000557588 PDE8AO60658 829 aa23.79■■□□□ 1.4
ABCD4-228ENST00000557588 ATP2B4P23634 1241 aa23.79■■□□□ 1.4
ABCD4-228ENST00000557588 SPEF2Q9C093 1822 aa23.78■■□□□ 1.4
ABCD4-228ENST00000557588 UBE2Q2LH0YL09 131 aa23.78■■□□□ 1.4
ABCD4-228ENST00000557588 TBC1D8O95759 1140 aa23.78■■□□□ 1.4
ABCD4-228ENST00000557588 TM4SF4P48230 202 aa23.78■■□□□ 1.4
ABCD4-228ENST00000557588 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
ABCD4-228ENST00000557588 HTTP42858 3142 aa23.77■■□□□ 1.4
ABCD4-228ENST00000557588 MYD88Q99836 296 aa23.77■■□□□ 1.4
ABCD4-228ENST00000557588 CFHR5Q9BXR6 569 aa23.77■■□□□ 1.4
ABCD4-228ENST00000557588 PHAXQ9H814 394 aaKnown RBP23.77■■□□□ 1.4
ABCD4-228ENST00000557588 MBIPQ9NS73 344 aa23.77■■□□□ 1.4
ABCD4-228ENST00000557588 SCAF8Q9UPN6 1271 aaKnown RBP23.77■■□□□ 1.4
ABCD4-228ENST00000557588 MYH3P11055 1940 aa23.76■■□□□ 1.39
ABCD4-228ENST00000557588 GPR25O00155 361 aa23.76■■□□□ 1.39
ABCD4-228ENST00000557588 NBPF9Q3BBW0 867 aa23.76■■□□□ 1.39
ABCD4-228ENST00000557588 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
ABCD4-228ENST00000557588 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
ABCD4-228ENST00000557588 FBXO46Q6PJ61 603 aaPredicted RBP23.75■■□□□ 1.39
ABCD4-228ENST00000557588 MYO3BQ8WXR4 1341 aa23.75■■□□□ 1.39
ABCD4-228ENST00000557588 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
ABCD4-228ENST00000557588 LAMB1P07942 1786 aa23.75■■□□□ 1.39
ABCD4-228ENST00000557588 ZNF853P0CG23 659 aa23.74■■□□□ 1.39
ABCD4-228ENST00000557588 SREBF2Q12772 1141 aa23.74■■□□□ 1.39
ABCD4-228ENST00000557588 DACT2Q5SW24 774 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms