RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-215	ENST00000557517	MAP3K2	Q9Y2U5	619 aa		13.62	□□□□□ -0.23
PSMC6-215	ENST00000557517	VAMP4	O75379	141 aa		13.61	□□□□□ -0.23
PSMC6-215	ENST00000557517	OTUD5	Q96G74	571 aa		13.61	□□□□□ -0.23
PSMC6-215	ENST00000557517	CWC25	Q9NXE8	425 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMC6-215	ENST00000557517	GJA3	Q9Y6H8	435 aa		13.61	□□□□□ -0.23
PSMC6-215	ENST00000557517	COL4A5	P29400	1685 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	TMEM88B	A6NKF7	163 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	POTEB2	H3BUK9	544 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	PDE8A	O60658	829 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	IGKV5-2	P06315	115 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	EPS15	P42566	896 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	LBX1	P52954	281 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	EAPP	Q56P03	285 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	ASTL	Q6HA08	431 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	CNTROB	Q8N137	903 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	ABHD8	Q96I13	439 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	STK31	Q9BXU1	1019 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	THSD7B	Q9C0I4	1608 aa		13.6	□□□□□ -0.23
PSMC6-215	ENST00000557517	RASSF10	A6NK89	507 aa		13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	HSPA8	P11142	646 aa	Known RBP	13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	USP50	Q70EL3	339 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	G2E3	Q7L622	706 aa		13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	PODXL2	Q9NZ53	605 aa		13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	GPRC5D	Q9NZD1	345 aa		13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	POLL	Q9UGP5	575 aa		13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517	PDE4DIP	Q5VU43	2346 aa		13.59	□□□□□ -0.23
PSMC6-215	ENST00000557517		H7C1W4	665 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	ATMIN	O43313	823 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	LMOD1	P29536	600 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	GPSM2	P81274	684 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	WASHC4	Q2M389	1173 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	FAM161A	Q3B820	660 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	SEC31B	Q9NQW1	1179 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	PGAP2	Q9UHJ9	254 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	CDHR2	Q9BYE9	1310 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	FANCI	Q9NVI1	1328 aa		13.58	□□□□□ -0.24
PSMC6-215	ENST00000557517	YDJC	A8MPS7	323 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	NEXN	Q0ZGT2	675 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	TNIP1	Q15025	636 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	CCDC152	Q4G0S7	254 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	MAP1S	Q66K74	1059 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	CIAPIN1	Q6FI81	312 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	SLC39A7	Q92504	469 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	JARID2	Q92833	1246 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	PCDH10	Q9P2E7	1040 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	METRN	Q9UJH8	293 aa		13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	SALL2	Q9Y467	1007 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC6-215	ENST00000557517	NEURL1B	A8MQ27	555 aa		13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	RGS19	P49795	217 aa		13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	EXOSC9	Q06265	439 aa	Known RBP	13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	FLII	Q13045	1269 aa		13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	CWF19L2	Q2TBE0	894 aa	Known RBP	13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	FAM9B	Q8IZU0	186 aa		13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	TTLL11	Q8NHH1	800 aa		13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	TBC1D16	Q8TBP0	767 aa		13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	ADARB2	Q9NS39	739 aa	Known RBP	13.56	□□□□□ -0.24
PSMC6-215	ENST00000557517	C6orf229	H3BNL8	230 aa		13.55	□□□□□ -0.24
PSMC6-215	ENST00000557517	RAD17	O75943	681 aa		13.55	□□□□□ -0.24
PSMC6-215	ENST00000557517	C7	P10643	843 aa		13.55	□□□□□ -0.24
PSMC6-215	ENST00000557517	GMPS	P49915	693 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMC6-215	ENST00000557517	DPF2	Q92785	391 aa		13.55	□□□□□ -0.24
PSMC6-215	ENST00000557517	CTSW	P56202	376 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	MAP2K1	Q02750	393 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	GCKR	Q14397	625 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	DEFB115	Q30KQ5	88 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	LINS1	Q8NG48	757 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	ZC3H15	Q8WU90	426 aa	Known RBP	13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	EYA3	Q99504	573 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	PLA2G12B	Q9BX93	195 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	MYH16	Q9H6N6	1097 aa		13.54	□□□□□ -0.24
PSMC6-215	ENST00000557517	RIMBP2	O15034	1052 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	CSF1R	P07333	972 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	HIRA	P54198	1017 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	CASP7	P55210	303 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	ANKRD18A	Q8IVF6	992 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	DNAAF4	Q8WXU2	420 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	KIF12	Q96FN5	646 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	BSDC1	Q9NW68	430 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	CNOT7	Q9UIV1	285 aa	Known RBP	13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	ZNF521	Q96K83	1311 aa		13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	WDR33	Q9C0J8	1336 aa	Known RBP	13.53	□□□□□ -0.24
PSMC6-215	ENST00000557517	FKBP5	Q13451	457 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	CST9	Q5W186	159 aa		13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	PLCD3	Q8N3E9	789 aa		13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	CDC5L	Q99459	802 aa	Known RBP	13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	DBNDD1	Q9H9R9	158 aa		13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	KCNQ5	Q9NR82	932 aa		13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	ANKIB1	Q9P2G1	1089 aa		13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	RTL9	Q8NET4	1388 aa		13.52	□□□□□ -0.25
PSMC6-215	ENST00000557517	TRPM7	Q96QT4	1865 aa		13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517	ANKRD36C	Q5JPF3	1778 aa		13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517		H7C1D1	291 aa		13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517	PSMD14	O00487	310 aa		13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517	VIL1	P09327	827 aa	Known RBP	13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517	RPS12	P25398	132 aa	Known RBP	13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517	MLLT1	Q03111	559 aa	Predicted RBP	13.51	□□□□□ -0.25
PSMC6-215	ENST00000557517	DOK7	Q18PE1	504 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms