RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
PSEN1-221ENST00000557293 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
PSEN1-221ENST00000557293 NEFMP07197 916 aa16.52■□□□□ 0.24
PSEN1-221ENST00000557293 ZNF280AP59817 542 aaPredicted RBP16.52■□□□□ 0.24
PSEN1-221ENST00000557293 MOB2Q70IA6 237 aa16.52■□□□□ 0.24
PSEN1-221ENST00000557293 SULF1Q8IWU6 871 aa16.52■□□□□ 0.24
PSEN1-221ENST00000557293 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
PSEN1-221ENST00000557293 FAM89AQ96GI7 184 aa16.52■□□□□ 0.24
PSEN1-221ENST00000557293 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
PSEN1-221ENST00000557293 SCARF1Q14162 830 aa16.51■□□□□ 0.23
PSEN1-221ENST00000557293 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
PSEN1-221ENST00000557293 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
PSEN1-221ENST00000557293 GMLQ99445 158 aa16.51■□□□□ 0.23
PSEN1-221ENST00000557293 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
PSEN1-221ENST00000557293 TBC1D8O95759 1140 aa16.5■□□□□ 0.23
PSEN1-221ENST00000557293 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
PSEN1-221ENST00000557293 ANGEL2Q5VTE6 544 aaKnown RBP16.5■□□□□ 0.23
PSEN1-221ENST00000557293 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
PSEN1-221ENST00000557293 FKBP1BP68106 108 aa16.49■□□□□ 0.23
PSEN1-221ENST00000557293 PKN2Q16513 984 aaKnown RBP16.49■□□□□ 0.23
PSEN1-221ENST00000557293 EYA3Q99504 573 aa16.49■□□□□ 0.23
PSEN1-221ENST00000557293 ATP5J2-PTCD1G3V325 749 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 UBE2Q2LH0YL09 131 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 TM4SF4P48230 202 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 RIPK4P57078 832 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 AGBL3Q8NEM8 1001 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 PLBD2Q8NHP8 589 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
PSEN1-221ENST00000557293 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
PSEN1-221ENST00000557293 ZNF609O15014 1411 aa16.47■□□□□ 0.23
PSEN1-221ENST00000557293 TRIM28Q13263 835 aaKnown RBP16.47■□□□□ 0.23
PSEN1-221ENST00000557293 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
PSEN1-221ENST00000557293 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
PSEN1-221ENST00000557293 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
PSEN1-221ENST00000557293 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
PSEN1-221ENST00000557293 SEC31BQ9NQW1 1179 aa16.47■□□□□ 0.23
PSEN1-221ENST00000557293 GPR25O00155 361 aa16.46■□□□□ 0.23
PSEN1-221ENST00000557293 CHL1O00533 1208 aa16.46■□□□□ 0.23
PSEN1-221ENST00000557293 NOM1Q5C9Z4 860 aaKnown RBP16.46■□□□□ 0.23
PSEN1-221ENST00000557293 PRAMEF18Q5VWM3 479 aa16.46■□□□□ 0.23
PSEN1-221ENST00000557293 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
PSEN1-221ENST00000557293 HDAC9Q9UKV0 1011 aa16.46■□□□□ 0.23
PSEN1-221ENST00000557293 IRS4O14654 1257 aaPredicted RBP16.45■□□□□ 0.22
PSEN1-221ENST00000557293 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
PSEN1-221ENST00000557293 PITPNM2Q9BZ72 1349 aa16.45■□□□□ 0.22
PSEN1-221ENST00000557293 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
PSEN1-221ENST00000557293 PAPPA2Q9BXP8 1791 aa16.44■□□□□ 0.22
PSEN1-221ENST00000557293 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-221ENST00000557293 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
PSEN1-221ENST00000557293 FBXO46Q6PJ61 603 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-221ENST00000557293 MYOZ2Q9NPC6 264 aa16.44■□□□□ 0.22
PSEN1-221ENST00000557293 UFL1O94874 794 aa16.43■□□□□ 0.22
PSEN1-221ENST00000557293 USP17L8P0C7I0 530 aa16.43■□□□□ 0.22
PSEN1-221ENST00000557293 NBPF9Q3BBW0 867 aa16.43■□□□□ 0.22
PSEN1-221ENST00000557293 CFHR5Q9BXR6 569 aa16.43■□□□□ 0.22
PSEN1-221ENST00000557293 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
PSEN1-221ENST00000557293 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
PSEN1-221ENST00000557293 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
PSEN1-221ENST00000557293 PSME4Q14997 1843 aa16.4■□□□□ 0.22
PSEN1-221ENST00000557293 FKTNO75072 461 aa16.4■□□□□ 0.22
PSEN1-221ENST00000557293 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
PSEN1-221ENST00000557293 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 G3V3G9 751 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
PSEN1-221ENST00000557293 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 DCAF8Q5TAQ9 597 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-221ENST00000557293 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-221ENST00000557293 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
PSEN1-221ENST00000557293 POTEFA5A3E0 1075 aa16.38■□□□□ 0.21
PSEN1-221ENST00000557293 WNT10BO00744 389 aa16.38■□□□□ 0.21
PSEN1-221ENST00000557293 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
PSEN1-221ENST00000557293 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
PSEN1-221ENST00000557293 HOXB7P09629 217 aa16.37■□□□□ 0.21
PSEN1-221ENST00000557293 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
PSEN1-221ENST00000557293 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
PSEN1-221ENST00000557293 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-221ENST00000557293 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
PSEN1-221ENST00000557293 LMOD3Q0VAK6 560 aa16.36■□□□□ 0.21
PSEN1-221ENST00000557293 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
PSEN1-221ENST00000557293 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
PSEN1-221ENST00000557293 XDHP47989 1333 aa16.36■□□□□ 0.21
PSEN1-221ENST00000557293 PDE8AO60658 829 aa16.35■□□□□ 0.21
PSEN1-221ENST00000557293 TTLL12Q14166 644 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-221ENST00000557293 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
PSEN1-221ENST00000557293 DUSP27Q5VZP5 1158 aa16.35■□□□□ 0.21
PSEN1-221ENST00000557293 ZBED3Q96IU2 234 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-221ENST00000557293 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-221ENST00000557293 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
PSEN1-221ENST00000557293 ZNF646O15015 1829 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-221ENST00000557293 SREBF2Q12772 1141 aa16.34■□□□□ 0.21
PSEN1-221ENST00000557293 PRKG1Q13976 671 aa16.34■□□□□ 0.21
PSEN1-221ENST00000557293 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
PSEN1-221ENST00000557293 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
PSEN1-221ENST00000557293 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms