RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 MAP10Q9P2G4 905 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 RRP7AQ9Y3A4 280 aaKnown RBP7.03□□□□□ -1.28
ATXN3-244ENST00000556898 RTL1A6NKG5 1358 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 RGPD5Q99666 1765 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 PRKAR2BP31323 418 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 CTHP32929 405 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 TUSC1Q2TAM9 212 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 PHACTR3Q96KR7 559 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 PLEKHF1Q96S99 279 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 NUDCQ9Y266 331 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 LMO7Q8WWI1 1683 aa7.02□□□□□ -1.29
ATXN3-244ENST00000556898 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 IGSF1Q8N6C5 1336 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 RGPD2P0DJD1 1756 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 RREB1Q92766 1687 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-244ENST00000556898 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 APAF1O14727 1248 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 SPTLC1O15269 473 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 F12P00748 615 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-244ENST00000556898 NR3C2P08235 984 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 CSB-PGBD3P0DP91 1061 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 POLD1P28340 1107 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 IL27Q8NEV9 243 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 CDK15Q96Q40 435 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 ZFAND3Q9H8U3 227 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 NLRP2Q9NX02 1062 aa7.01□□□□□ -1.29
ATXN3-244ENST00000556898 ADH1CP00326 375 aa7□□□□□ -1.29
ATXN3-244ENST00000556898 GRM5P41594 1212 aa7□□□□□ -1.29
ATXN3-244ENST00000556898 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
ATXN3-244ENST00000556898 RUNDC1Q96C34 613 aa7□□□□□ -1.29
ATXN3-244ENST00000556898 NUP188Q5SRE5 1749 aa7□□□□□ -1.29
ATXN3-244ENST00000556898 CLK2P49760 499 aaKnown RBP6.99□□□□□ -1.29
ATXN3-244ENST00000556898 ARID5BQ14865 1188 aa6.99□□□□□ -1.29
ATXN3-244ENST00000556898 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
ATXN3-244ENST00000556898 FAM174AQ8TBP5 190 aa6.99□□□□□ -1.29
ATXN3-244ENST00000556898 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
ATXN3-244ENST00000556898 KDRP35968 1356 aa6.98□□□□□ -1.29
ATXN3-244ENST00000556898 MEGF6O75095 1541 aa6.98□□□□□ -1.29
ATXN3-244ENST00000556898 FAM208AQ9UK61 1670 aaKnown RBP6.98□□□□□ -1.29
ATXN3-244ENST00000556898 TMPOP42166 694 aaKnown RBP6.98□□□□□ -1.29
ATXN3-244ENST00000556898 SCARF1Q14162 830 aa6.98□□□□□ -1.29
ATXN3-244ENST00000556898 MTHFSDQ2M296 383 aaKnown RBP6.98□□□□□ -1.29
ATXN3-244ENST00000556898 PRPF38BQ5VTL8 546 aaKnown RBP6.98□□□□□ -1.29
ATXN3-244ENST00000556898 ACSBG1Q96GR2 724 aa6.98□□□□□ -1.29
ATXN3-244ENST00000556898 LIMD1Q9UGP4 676 aa6.98□□□□□ -1.29
ATXN3-244ENST00000556898 MAPK8IP3Q9UPT6 1336 aa6.98□□□□□ -1.29
ATXN3-244ENST00000556898 ABCC6O95255 1503 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 ZIC2O95409 532 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-244ENST00000556898 HSPA6P17066 643 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 RIPK4P57078 832 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 DCTN1Q14203 1278 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 NCAPD2Q15021 1401 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 SLC27A3Q5K4L6 730 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 C6orf118Q5T5N4 469 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 RIC3Q7Z5B4 369 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 THUMPD2Q9BTF0 503 aaKnown RBP6.97□□□□□ -1.29
ATXN3-244ENST00000556898 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-244ENST00000556898 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
ATXN3-244ENST00000556898 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.3
ATXN3-244ENST00000556898 VSIG8P0DPA2 414 aa6.96□□□□□ -1.3
ATXN3-244ENST00000556898 NFE2L2Q16236 605 aa6.96□□□□□ -1.3
ATXN3-244ENST00000556898 CSPP1Q1MSJ5 1256 aa6.96□□□□□ -1.3
ATXN3-244ENST00000556898 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
ATXN3-244ENST00000556898 UTRNP46939 3433 aa6.96□□□□□ -1.3
ATXN3-244ENST00000556898 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 IL2RBP14784 551 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-244ENST00000556898 TATP17735 454 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-244ENST00000556898 QPCTQ16769 361 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 MCM10Q7L590 875 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 ZBTB3Q9H5J0 574 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 PARP4Q9UKK3 1724 aaKnown RBP6.95□□□□□ -1.3
ATXN3-244ENST00000556898 ZBED9Q6R2W3 1325 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 ZNF521Q96K83 1311 aa6.95□□□□□ -1.3
ATXN3-244ENST00000556898 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 NR5A1Q13285 461 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 PLEKHO1Q53GL0 409 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-244ENST00000556898 ZNF530Q6P9A1 599 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-244ENST00000556898 WWC1Q8IX03 1113 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 RAPGEF4Q8WZA2 1011 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 PNNQ9H307 717 aaKnown RBP6.94□□□□□ -1.3
ATXN3-244ENST00000556898 LGR6Q9HBX8 967 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 POLR3EQ9NVU0 708 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
ATXN3-244ENST00000556898 CYP27B1O15528 508 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 LILRB3O75022 631 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 NEFMP07197 916 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
ATXN3-244ENST00000556898 AGERQ15109 404 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 PPP2R2DQ66LE6 453 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 MPRIPQ6WCQ1 1025 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms