RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 CFAP44Q96MT7 982 aa20.5■□□□□ 0.87
RCCD1-207ENST00000556774 EYA3Q99504 573 aa20.5■□□□□ 0.87
RCCD1-207ENST00000556774 MBIPQ9NS73 344 aa20.5■□□□□ 0.87
RCCD1-207ENST00000556774 RPS12P25398 132 aaKnown RBP20.49■□□□□ 0.87
RCCD1-207ENST00000556774 MCOLN1Q9GZU1 580 aa20.49■□□□□ 0.87
RCCD1-207ENST00000556774 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
RCCD1-207ENST00000556774 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
RCCD1-207ENST00000556774 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
RCCD1-207ENST00000556774 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
RCCD1-207ENST00000556774 GOLGA2Q08379 1002 aa20.48■□□□□ 0.87
RCCD1-207ENST00000556774 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
RCCD1-207ENST00000556774 KIF4BQ2VIQ3 1234 aa20.48■□□□□ 0.87
RCCD1-207ENST00000556774 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
RCCD1-207ENST00000556774 AKAP11Q9UKA4 1901 aa20.47■□□□□ 0.87
RCCD1-207ENST00000556774 RIC3Q7Z5B4 369 aa20.47■□□□□ 0.87
RCCD1-207ENST00000556774 DCPSQ96C86 337 aaKnown RBP20.47■□□□□ 0.87
RCCD1-207ENST00000556774 PHAXQ9H814 394 aaKnown RBP20.47■□□□□ 0.87
RCCD1-207ENST00000556774 FAM155AB1AL88 458 aaPredicted RBP20.46■□□□□ 0.87
RCCD1-207ENST00000556774 UFL1O94874 794 aa20.46■□□□□ 0.87
RCCD1-207ENST00000556774 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
RCCD1-207ENST00000556774 GGA3Q9NZ52 723 aa20.46■□□□□ 0.87
RCCD1-207ENST00000556774 ASTN2O75129 1339 aaPredicted RBP20.46■□□□□ 0.87
RCCD1-207ENST00000556774 MLLT1Q03111 559 aaPredicted RBP20.45■□□□□ 0.86
RCCD1-207ENST00000556774 DGKZQ13574 1117 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 RGMBQ6NW40 437 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 C2orf69Q8N8R5 385 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 MYD88Q99836 296 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 ZC3H12CQ9C0D7 883 aaKnown RBP20.45■□□□□ 0.86
RCCD1-207ENST00000556774 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 ANKIB1Q9P2G1 1089 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 MYH3P11055 1940 aa20.45■□□□□ 0.86
RCCD1-207ENST00000556774 G3V3G9 751 aa20.44■□□□□ 0.86
RCCD1-207ENST00000556774 VIL1P09327 827 aaKnown RBP20.44■□□□□ 0.86
RCCD1-207ENST00000556774 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
RCCD1-207ENST00000556774 DCAF8Q5TAQ9 597 aa20.44■□□□□ 0.86
RCCD1-207ENST00000556774 JARID2Q92833 1246 aaPredicted RBP20.44■□□□□ 0.86
RCCD1-207ENST00000556774 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
RCCD1-207ENST00000556774 GGA1Q9UJY5 639 aa20.44■□□□□ 0.86
RCCD1-207ENST00000556774 ELL2O00472 640 aaPredicted RBP20.43■□□□□ 0.86
RCCD1-207ENST00000556774 RGS19P49795 217 aa20.43■□□□□ 0.86
RCCD1-207ENST00000556774 ZNF609O15014 1411 aa20.43■□□□□ 0.86
RCCD1-207ENST00000556774 PCCAP05165 728 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-207ENST00000556774 ZNF157P51786 506 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-207ENST00000556774 CCDC152Q4G0S7 254 aa20.42■□□□□ 0.86
RCCD1-207ENST00000556774 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
RCCD1-207ENST00000556774 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
RCCD1-207ENST00000556774 ZNF646O15015 1829 aaPredicted RBP20.41■□□□□ 0.86
RCCD1-207ENST00000556774 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
RCCD1-207ENST00000556774 KIF23Q02241 960 aaPredicted RBP20.41■□□□□ 0.86
RCCD1-207ENST00000556774 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
RCCD1-207ENST00000556774 CCDC102AQ96A19 550 aa20.41■□□□□ 0.86
RCCD1-207ENST00000556774 CDCA5Q96FF9 252 aa20.41■□□□□ 0.86
RCCD1-207ENST00000556774 PDE8AO60658 829 aa20.4■□□□□ 0.86
RCCD1-207ENST00000556774 RSBN1LQ6PCB5 846 aaPredicted RBP20.4■□□□□ 0.86
RCCD1-207ENST00000556774 PAPPA2Q9BXP8 1791 aa20.4■□□□□ 0.86
RCCD1-207ENST00000556774 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
RCCD1-207ENST00000556774 APAF1O14727 1248 aa20.39■□□□□ 0.85
RCCD1-207ENST00000556774 SLC10A3P09131 477 aa20.39■□□□□ 0.85
RCCD1-207ENST00000556774 GNAI1P63096 354 aa20.39■□□□□ 0.85
RCCD1-207ENST00000556774 ANGEL2Q5VTE6 544 aaKnown RBP20.39■□□□□ 0.85
RCCD1-207ENST00000556774 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
RCCD1-207ENST00000556774 XDHP47989 1333 aa20.38■□□□□ 0.85
RCCD1-207ENST00000556774 ZNF280AP59817 542 aaPredicted RBP20.38■□□□□ 0.85
RCCD1-207ENST00000556774 SCARF1Q14162 830 aa20.38■□□□□ 0.85
RCCD1-207ENST00000556774 ANKRD18AQ8IVF6 992 aa20.38■□□□□ 0.85
RCCD1-207ENST00000556774 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
RCCD1-207ENST00000556774 AGBL3Q8NEM8 1001 aa20.38■□□□□ 0.85
RCCD1-207ENST00000556774 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
RCCD1-207ENST00000556774 TNRC18O15417 2968 aaPredicted RBP20.37■□□□□ 0.85
RCCD1-207ENST00000556774 TRPA1O75762 1119 aa20.37■□□□□ 0.85
RCCD1-207ENST00000556774 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
RCCD1-207ENST00000556774 RNF186Q9NXI6 227 aa20.37■□□□□ 0.85
RCCD1-207ENST00000556774 SLC34A2O95436 690 aa20.36■□□□□ 0.85
RCCD1-207ENST00000556774 CTSWP56202 376 aa20.36■□□□□ 0.85
RCCD1-207ENST00000556774 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
RCCD1-207ENST00000556774 PDE4DIPQ5VU43 2346 aa20.36■□□□□ 0.85
RCCD1-207ENST00000556774 DDX58O95786 925 aaKnown RBP20.35■□□□□ 0.85
RCCD1-207ENST00000556774 GMLQ99445 158 aa20.35■□□□□ 0.85
RCCD1-207ENST00000556774 PRKRIP1Q9H875 184 aaPredicted RBP20.35■□□□□ 0.85
RCCD1-207ENST00000556774 MYOZ2Q9NPC6 264 aa20.35■□□□□ 0.85
RCCD1-207ENST00000556774 SCAF8Q9UPN6 1271 aaKnown RBP20.35■□□□□ 0.85
RCCD1-207ENST00000556774 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
RCCD1-207ENST00000556774 USP17L3A6NCW0 530 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 USP17L4A6NCW7 530 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 WTIPA6NIX2 430 aaPredicted RBP20.34■□□□□ 0.85
RCCD1-207ENST00000556774 USP17L8P0C7I0 530 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 ATP2B4P23634 1241 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 CCDC30Q5VVM6 783 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 USP17L1Q7RTZ2 530 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 CSRNP1Q96S65 589 aa20.34■□□□□ 0.85
RCCD1-207ENST00000556774 TSPYL6Q8N831 410 aa20.33■□□□□ 0.85
RCCD1-207ENST00000556774 CDC5LQ99459 802 aaKnown RBP20.33■□□□□ 0.85
RCCD1-207ENST00000556774 MED23Q9ULK4 1368 aa20.33■□□□□ 0.84
RCCD1-207ENST00000556774 PITPNM2Q9BZ72 1349 aa20.32■□□□□ 0.84
RCCD1-207ENST00000556774 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
RCCD1-207ENST00000556774 MOB2Q70IA6 237 aa20.32■□□□□ 0.84
RCCD1-207ENST00000556774 PODNQ7Z5L7 613 aa20.31■□□□□ 0.84
RCCD1-207ENST00000556774 MXD3Q9BW11 206 aa20.31■□□□□ 0.84
RCCD1-207ENST00000556774 GREM2Q9H772 168 aa20.31■□□□□ 0.84
RCCD1-207ENST00000556774 PI4KAP2A4QPH2 592 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms