RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 C7orf43Q8WVR3 580 aa21.62■■□□□ 1.05
TUBB3-211ENST00000556536 DLEC1Q9Y238 1755 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 TAF1P21675 1872 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 EYA2O00167 538 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 KIF3CO14782 793 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 SURF6O75683 361 aaKnown RBP21.61■■□□□ 1.05
TUBB3-211ENST00000556536 ATG9AQ7Z3C6 839 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 CNNM1Q9NRU3 951 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 MINPP1Q9UNW1 487 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 EXOC6BQ9Y2D4 811 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 NOP58Q9Y2X3 529 aaKnown RBP21.61■■□□□ 1.05
TUBB3-211ENST00000556536 ATP6V0A2Q9Y487 856 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 RIPOR2Q9Y4F9 1068 aa21.61■■□□□ 1.05
TUBB3-211ENST00000556536 ERICH6BQ5W0A0 696 aa21.6■■□□□ 1.05
TUBB3-211ENST00000556536 SP8Q8IXZ3 490 aa21.6■■□□□ 1.05
TUBB3-211ENST00000556536 BCS1LQ9Y276 419 aa21.6■■□□□ 1.05
TUBB3-211ENST00000556536 C21orf2O43822 256 aa21.59■■□□□ 1.05
TUBB3-211ENST00000556536 CIAO1O76071 339 aa21.59■■□□□ 1.05
TUBB3-211ENST00000556536 TMC4Q7Z404 712 aa21.59■■□□□ 1.05
TUBB3-211ENST00000556536 RWDD1Q9H446 243 aaPredicted RBP21.59■■□□□ 1.05
TUBB3-211ENST00000556536 SLX4Q8IY92 1834 aa21.58■■□□□ 1.05
TUBB3-211ENST00000556536 CHRNDQ07001 517 aa21.58■■□□□ 1.05
TUBB3-211ENST00000556536 G3BP1Q13283 466 aaKnown RBP eCLIP21.58■■□□□ 1.051e-8■□□□□ 8.1
TUBB3-211ENST00000556536 HELBQ8NG08 1087 aaPredicted RBP21.58■■□□□ 1.05
TUBB3-211ENST00000556536 DCTPP1Q9H773 170 aa21.58■■□□□ 1.05
TUBB3-211ENST00000556536 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
TUBB3-211ENST00000556536 IL15P40933 162 aaPredicted RBP21.57■■□□□ 1.04
TUBB3-211ENST00000556536 APLP1P51693 650 aa21.57■■□□□ 1.04
TUBB3-211ENST00000556536 SASH1O94885 1247 aa21.56■■□□□ 1.04
TUBB3-211ENST00000556536 GPSM2P81274 684 aa21.56■■□□□ 1.04
TUBB3-211ENST00000556536 OS9Q13438 667 aaPredicted RBP21.56■■□□□ 1.04
TUBB3-211ENST00000556536 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
TUBB3-211ENST00000556536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.56■■□□□ 1.04
TUBB3-211ENST00000556536 MROH5Q6ZUA9 1318 aa21.55■■□□□ 1.04
TUBB3-211ENST00000556536 WTIPA6NIX2 430 aaPredicted RBP21.55■■□□□ 1.04
TUBB3-211ENST00000556536 APBB1O00213 710 aa21.55■■□□□ 1.04
TUBB3-211ENST00000556536 TAF5LO75529 589 aa21.55■■□□□ 1.04
TUBB3-211ENST00000556536 TFCP2Q12800 502 aa21.55■■□□□ 1.04
TUBB3-211ENST00000556536 SNAP23O00161 211 aa21.54■■□□□ 1.04
TUBB3-211ENST00000556536 VGLL2Q8N8G2 317 aa21.54■■□□□ 1.04
TUBB3-211ENST00000556536 PPP4R2Q9NY27 417 aa21.54■■□□□ 1.04
TUBB3-211ENST00000556536 SNED1Q8TER0 1413 aa21.54■■□□□ 1.04
TUBB3-211ENST00000556536 BRCA1P38398 1863 aaKnown RBP21.54■■□□□ 1.04
TUBB3-211ENST00000556536 TOMM70O94826 608 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 CCDC93Q567U6 631 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 HSP90AB4PQ58FF6 505 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 B4GALNT3Q6L9W6 998 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 ANKRD2Q9GZV1 360 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 ANKIB1Q9P2G1 1089 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 CEP126Q9P2H0 1117 aa21.53■■□□□ 1.04
TUBB3-211ENST00000556536 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
TUBB3-211ENST00000556536 SPEF2Q9C093 1822 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 RAB11FIP3O75154 756 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 CC2D2BQ6DHV5 1058 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 MPNDQ8N594 471 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 RHPN1Q8TCX5 695 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 CCDC136Q96JN2 1154 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 TMX4Q9H1E5 349 aaPredicted RBP21.52■■□□□ 1.04
TUBB3-211ENST00000556536 PODXL2Q9NZ53 605 aa21.52■■□□□ 1.04
TUBB3-211ENST00000556536 XDHP47989 1333 aa21.52■■□□□ 1.03
TUBB3-211ENST00000556536 PDE8BO95263 885 aa21.51■■□□□ 1.03
TUBB3-211ENST00000556536 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
TUBB3-211ENST00000556536 ERC1Q8IUD2 1116 aa21.51■■□□□ 1.03
TUBB3-211ENST00000556536 SMC5Q8IY18 1101 aa21.51■■□□□ 1.03
TUBB3-211ENST00000556536 GCC1Q96CN9 775 aa21.51■■□□□ 1.03
TUBB3-211ENST00000556536 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
TUBB3-211ENST00000556536 CACNA1SQ13698 1873 aa21.5■■□□□ 1.03
TUBB3-211ENST00000556536 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
TUBB3-211ENST00000556536 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
TUBB3-211ENST00000556536 TBC1D16Q8TBP0 767 aa21.5■■□□□ 1.03
TUBB3-211ENST00000556536 GPR101Q96P66 508 aaPredicted RBP21.5■■□□□ 1.03
TUBB3-211ENST00000556536 POLLQ9UGP5 575 aa21.5■■□□□ 1.03
TUBB3-211ENST00000556536 RTKN2Q8IZC4 609 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 DNAJC5GQ8N7S2 189 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 KIF1BPQ96EK5 621 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 GGA1Q9UJY5 639 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 KDM2BQ8NHM5 1336 aa21.49■■□□□ 1.03
TUBB3-211ENST00000556536 UFL1O94874 794 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 FGFR2P21802 821 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 ATP2B4P23634 1241 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 LEMD3Q9Y2U8 911 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 ZNF804BA4D1E1 1349 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 DUOX1Q9NRD9 1551 aa21.48■■□□□ 1.03
TUBB3-211ENST00000556536 C6orf229H3BNL8 230 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 NFKBIEO00221 500 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 KLRK1P26718 216 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 KCNJ4P48050 445 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 PUM3Q15397 648 aaKnown RBP21.47■■□□□ 1.03
TUBB3-211ENST00000556536 ATP2B3Q16720 1220 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 GRIPAP1Q4V328 841 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 ANKRD45Q5TZF3 282 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 RTFDC1Q9BY42 306 aaPredicted RBP21.47■■□□□ 1.03
TUBB3-211ENST00000556536 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
TUBB3-211ENST00000556536 TIMM10P62072 90 aa21.46■■□□□ 1.03
TUBB3-211ENST00000556536 FKBP4Q02790 459 aaKnown RBP eCLIP21.46■■□□□ 1.032e-6■■■■□ 22.8
TUBB3-211ENST00000556536 UBE4AQ14139 1066 aa21.46■■□□□ 1.03
TUBB3-211ENST00000556536 TNNI3KQ59H18 835 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 831.3 ms