RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 OPLAHO14841 1288 aa5.65□□□□□ -1.5
TGFB3-205ENST00000556507 PPP1R15AO75807 674 aaPredicted RBP5.65□□□□□ -1.5
TGFB3-205ENST00000556507 SASH3O75995 380 aa5.65□□□□□ -1.5
TGFB3-205ENST00000556507 BRD2P25440 801 aaKnown RBP5.65□□□□□ -1.5
TGFB3-205ENST00000556507 C20orf204Q6ZNR8 217 aa5.65□□□□□ -1.5
TGFB3-205ENST00000556507 CLP1Q92989 425 aaKnown RBP5.65□□□□□ -1.5
TGFB3-205ENST00000556507 SAP130Q9H0E3 1048 aa5.65□□□□□ -1.5
TGFB3-205ENST00000556507 USP20Q9Y2K6 914 aa5.65□□□□□ -1.5
TGFB3-205ENST00000556507 MYOM3Q5VTT5 1437 aa5.65□□□□□ -1.51
TGFB3-205ENST00000556507 IFT140Q96RY7 1462 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 C1QTNF9BB2RNN3 333 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 LILRB5O75023 590 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 PTCD1O75127 700 aaKnown RBP5.64□□□□□ -1.51
TGFB3-205ENST00000556507 MAP3K6O95382 1288 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 PROCP04070 461 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 SPATA31C1P0DKV0 1188 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 RARAP10276 462 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 TARSP26639 723 aaKnown RBP5.64□□□□□ -1.51
TGFB3-205ENST00000556507 COL9A3Q14050 684 aaPredicted RBP5.64□□□□□ -1.51
TGFB3-205ENST00000556507 NAA30Q147X3 362 aaPredicted RBP5.64□□□□□ -1.51
TGFB3-205ENST00000556507 PCSK7Q16549 785 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 PRRT3Q5FWE3 981 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 CAPN12Q6ZSI9 719 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 RGL4Q8IZJ4 473 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 CMTR1Q8N1G2 835 aaKnown RBP5.64□□□□□ -1.51
TGFB3-205ENST00000556507 CCDC82Q8N4S0 544 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 NUDT8Q8WV74 236 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 YTHDC1Q96MU7 727 aaKnown RBP5.64□□□□□ -1.51
TGFB3-205ENST00000556507 SIN3AQ96ST3 1273 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 ZFATQ9P243 1243 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 HFM1A2PYH4 1435 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 NCOA2Q15596 1464 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 EHBP1L1Q8N3D4 1523 aa5.64□□□□□ -1.51
TGFB3-205ENST00000556507 SUPT6HQ7KZ85 1726 aaKnown RBP5.63□□□□□ -1.51
TGFB3-205ENST00000556507 XYLBO75191 536 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 NID1P14543 1247 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 TRIM28Q13263 835 aaKnown RBP5.63□□□□□ -1.51
TGFB3-205ENST00000556507 SUZ12Q15022 739 aaKnown RBP5.63□□□□□ -1.51
TGFB3-205ENST00000556507 TRAPPC3LQ5T215 181 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 PSAPL1Q6NUJ1 521 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 DHX32Q7L7V1 743 aaKnown RBP5.63□□□□□ -1.51
TGFB3-205ENST00000556507 FAM35AQ86V20 835 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 CD163Q86VB7 1156 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 ETFBKMTQ8IXQ9 262 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 JPH1Q9HDC5 661 aaPredicted RBP5.63□□□□□ -1.51
TGFB3-205ENST00000556507 MIA2Q96PC5 1412 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 UACAQ9BZF9 1416 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 UGGT2Q9NYU1 1516 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 IQGAP2Q13576 1575 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 PBRM1Q86U86 1689 aa5.63□□□□□ -1.51
TGFB3-205ENST00000556507 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
TGFB3-205ENST00000556507 EGFRP00533 1210 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 CPB1P15086 417 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 ATP2B4P23634 1241 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 ARID4AP29374 1257 aaPredicted RBP5.62□□□□□ -1.51
TGFB3-205ENST00000556507 CHRNA4P43681 627 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 CDK11AQ9UQ88 783 aaPredicted RBP5.62□□□□□ -1.51
TGFB3-205ENST00000556507 TCOF1Q13428 1488 aaKnown RBP5.62□□□□□ -1.51
TGFB3-205ENST00000556507 ARHGEF11O15085 1522 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 KIAA0586Q9BVV6 1533 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 ADAMTS12P58397 1594 aa5.62□□□□□ -1.51
TGFB3-205ENST00000556507 FAM229AH3BQW9 127 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 WDR62O43379 1518 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 APBA3O96018 575 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 EPRSP07814 1512 aaKnown RBP5.61□□□□□ -1.51
TGFB3-205ENST00000556507 BAG6P46379 1132 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 NAIPQ13075 1403 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 PTPRKQ15262 1439 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 HECW1Q76N89 1606 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 TRPM4Q8TD43 1214 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 FAM13BQ9NYF5 915 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 SLAIN2Q9P270 581 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 NAGPAQ9UK23 515 aa5.61□□□□□ -1.51
TGFB3-205ENST00000556507 PTPN23Q9H3S7 1636 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 AKNAQ7Z591 1439 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 TONSLQ96HA7 1378 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 ZBTB42B2RXF5 422 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 TNFRSF10BO14763 440 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 AFF1P51825 1210 aaKnown RBP5.6□□□□□ -1.51
TGFB3-205ENST00000556507 GPLD1P80108 840 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 MLLT1Q03111 559 aaPredicted RBP5.6□□□□□ -1.51
TGFB3-205ENST00000556507 FAM26DQ5JW98 314 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 ELMSAN1Q6PJG2 1045 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 C1orf115Q9H7X2 142 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 TLR7Q9NYK1 1049 aaKnown RBP5.6□□□□□ -1.51
TGFB3-205ENST00000556507 STIM2Q9P246 746 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 KCNMB2Q9Y691 235 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 LRRIQ1Q96JM4 1722 aa5.6□□□□□ -1.51
TGFB3-205ENST00000556507 PSAPP07602 524 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 GATA4P43694 442 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 NRLP54845 237 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 PERM1Q5SV97 790 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 HFE2Q6ZVN8 426 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 ABTB2Q8N961 1025 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 NACC1Q96RE7 527 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 FRRS1LQ9P0K9 344 aa5.59□□□□□ -1.51
TGFB3-205ENST00000556507 ROCK1Q13464 1354 aa5.58□□□□□ -1.52
TGFB3-205ENST00000556507 A0A0A0MRY4 1105 aa5.58□□□□□ -1.52
TGFB3-205ENST00000556507 UBAP1LF5GYI3 381 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms