RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 SGPL1O95470 568 aa11.37□□□□□ -0.59
PSEN1-215ENST00000556011 CXCL9Q07325 125 aa11.37□□□□□ -0.59
PSEN1-215ENST00000556011 PRSS33Q8NF86 280 aa11.37□□□□□ -0.59
PSEN1-215ENST00000556011 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
PSEN1-215ENST00000556011 PSMD1Q99460 953 aa11.37□□□□□ -0.59
PSEN1-215ENST00000556011 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
PSEN1-215ENST00000556011 FAM205AQ6ZU69 1335 aa11.36□□□□□ -0.59
PSEN1-215ENST00000556011 CHD9Q3L8U1 2897 aa11.36□□□□□ -0.59
PSEN1-215ENST00000556011 EGFRP00533 1210 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
PSEN1-215ENST00000556011 AKNAD1Q5T1N1 836 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 NIM1KQ8IY84 436 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 USHBP1Q8N6Y0 703 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 FAM86C1Q9NVL1 165 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
PSEN1-215ENST00000556011 H7C1D1 291 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 PTPN5P54829 565 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
PSEN1-215ENST00000556011 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
PSEN1-215ENST00000556011 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 NARFQ9UHQ1 456 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 CDHR2Q9BYE9 1310 aa11.34□□□□□ -0.59
PSEN1-215ENST00000556011 KRT38O76015 456 aa11.33□□□□□ -0.6
PSEN1-215ENST00000556011 PRKG1Q13976 671 aa11.33□□□□□ -0.6
PSEN1-215ENST00000556011 DGLUCYQ7Z3D6 616 aa11.33□□□□□ -0.6
PSEN1-215ENST00000556011 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
PSEN1-215ENST00000556011 TAF1P21675 1872 aa11.33□□□□□ -0.6
PSEN1-215ENST00000556011 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
PSEN1-215ENST00000556011 ATRNL1Q5VV63 1379 aa11.32□□□□□ -0.6
PSEN1-215ENST00000556011 FRYQ5TBA9 3013 aa11.32□□□□□ -0.6
PSEN1-215ENST00000556011 TATP17735 454 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-215ENST00000556011 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
PSEN1-215ENST00000556011 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
PSEN1-215ENST00000556011 ARHGAP39Q9C0H5 1083 aa11.32□□□□□ -0.6
PSEN1-215ENST00000556011 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
PSEN1-215ENST00000556011 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 SPRYD7Q5W111 196 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 IP6K1Q92551 441 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 PLXNA3P51805 1871 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 SPEGQ15772 3267 aa11.31□□□□□ -0.6
PSEN1-215ENST00000556011 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
PSEN1-215ENST00000556011 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
PSEN1-215ENST00000556011 INHBEP58166 350 aa11.3□□□□□ -0.6
PSEN1-215ENST00000556011 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
PSEN1-215ENST00000556011 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-215ENST00000556011 GRK4P32298 578 aa11.29□□□□□ -0.6
PSEN1-215ENST00000556011 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-215ENST00000556011 SHHQ15465 462 aa11.29□□□□□ -0.6
PSEN1-215ENST00000556011 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
PSEN1-215ENST00000556011 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-215ENST00000556011 BIN2Q9UBW5 565 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-215ENST00000556011 SCN7AQ01118 1682 aa11.29□□□□□ -0.6
PSEN1-215ENST00000556011 ASTN2O75129 1339 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-215ENST00000556011 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
PSEN1-215ENST00000556011 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-215ENST00000556011 NBPF6Q5VWK0 638 aa11.28□□□□□ -0.6
PSEN1-215ENST00000556011 NBPF4Q96M43 638 aa11.28□□□□□ -0.6
PSEN1-215ENST00000556011 GGA3Q9NZ52 723 aa11.28□□□□□ -0.6
PSEN1-215ENST00000556011 CHD7Q9P2D1 2997 aa11.27□□□□□ -0.61
PSEN1-215ENST00000556011 RAD17O75943 681 aa11.27□□□□□ -0.61
PSEN1-215ENST00000556011 NPR1P16066 1061 aa11.27□□□□□ -0.61
PSEN1-215ENST00000556011 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
PSEN1-215ENST00000556011 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
PSEN1-215ENST00000556011 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
PSEN1-215ENST00000556011 TBC1D9BQ66K14 1250 aa11.27□□□□□ -0.61
PSEN1-215ENST00000556011 ASCL5Q7RTU5 278 aa11.27□□□□□ -0.61
PSEN1-215ENST00000556011 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-215ENST00000556011 TLL1O43897 1013 aa11.26□□□□□ -0.61
PSEN1-215ENST00000556011 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
PSEN1-215ENST00000556011 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
PSEN1-215ENST00000556011 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
PSEN1-215ENST00000556011 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
PSEN1-215ENST00000556011 MYO18BQ8IUG5 2567 aa11.26□□□□□ -0.61
PSEN1-215ENST00000556011 SOS1Q07889 1333 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-215ENST00000556011 LAMB1P07942 1786 aa11.26□□□□□ -0.61
PSEN1-215ENST00000556011 TCF15Q12870 199 aa11.25□□□□□ -0.61
PSEN1-215ENST00000556011 IER5LQ5T953 404 aa11.25□□□□□ -0.61
PSEN1-215ENST00000556011 HFE2Q6ZVN8 426 aa11.25□□□□□ -0.61
PSEN1-215ENST00000556011 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-215ENST00000556011 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-215ENST00000556011 DOPEY1Q5JWR5 2465 aa11.25□□□□□ -0.61
PSEN1-215ENST00000556011 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 UBXN2AP68543 259 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 ADGRE1Q14246 886 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 AOC3Q16853 763 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 RMDN1Q96DB5 314 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-215ENST00000556011 ZNF576Q9H609 170 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 TRPC6Q9Y210 931 aa11.24□□□□□ -0.61
PSEN1-215ENST00000556011 NBEAQ8NFP9 2946 aa11.23□□□□□ -0.61
PSEN1-215ENST00000556011 PRAMEF22A3QJZ6 481 aa11.23□□□□□ -0.61
PSEN1-215ENST00000556011 NPHP1O15259 732 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms