RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 ABCC4O15439 1325 aa11.35□□□□□ -0.59
CHD8-210ENST00000555962 LRRC37AA6NMS7 1700 aa11.35□□□□□ -0.59
CHD8-210ENST00000555962 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
CHD8-210ENST00000555962 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
CHD8-210ENST00000555962 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
CHD8-210ENST00000555962 POTEHQ6S545 545 aa11.35□□□□□ -0.59
CHD8-210ENST00000555962 ARIH1Q9Y4X5 557 aaPredicted RBP11.35□□□□□ -0.59
CHD8-210ENST00000555962 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
CHD8-210ENST00000555962 A0A1B0GUL6 1792 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 GRM8O00222 908 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 IPO8O15397 1037 aaKnown RBP11.34□□□□□ -0.59
CHD8-210ENST00000555962 PDE8AO60658 829 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 NBPF7P0C2Y1 421 aaPredicted RBP11.34□□□□□ -0.59
CHD8-210ENST00000555962 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
CHD8-210ENST00000555962 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 PRPF40BQ6NWY9 871 aaKnown RBP11.34□□□□□ -0.59
CHD8-210ENST00000555962 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 RPGRQ92834 1020 aaKnown RBP11.34□□□□□ -0.59
CHD8-210ENST00000555962 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 UTYO14607 1347 aa11.34□□□□□ -0.59
CHD8-210ENST00000555962 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
CHD8-210ENST00000555962 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
CHD8-210ENST00000555962 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
CHD8-210ENST00000555962 CNKSR1Q969H4 720 aa11.33□□□□□ -0.6
CHD8-210ENST00000555962 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
CHD8-210ENST00000555962 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
CHD8-210ENST00000555962 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
CHD8-210ENST00000555962 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
CHD8-210ENST00000555962 PLA2G12BQ9BX93 195 aa11.33□□□□□ -0.6
CHD8-210ENST00000555962 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
CHD8-210ENST00000555962 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
CHD8-210ENST00000555962 C21orf2O43822 256 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 RLBP1P12271 317 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 ALDH1B1P30837 517 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 CTSWP56202 376 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 FOXO4P98177 505 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 TTLL11Q8NHH1 800 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 SUCLG2Q96I99 432 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
CHD8-210ENST00000555962 PLIN1O60240 522 aa11.31□□□□□ -0.6
CHD8-210ENST00000555962 ZMYND10O75800 440 aa11.31□□□□□ -0.6
CHD8-210ENST00000555962 HSP90B1P14625 803 aaKnown RBP11.31□□□□□ -0.6
CHD8-210ENST00000555962 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
CHD8-210ENST00000555962 DDX46Q7L014 1031 aaKnown RBP11.31□□□□□ -0.6
CHD8-210ENST00000555962 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
CHD8-210ENST00000555962 GREM2Q9H772 168 aa11.31□□□□□ -0.6
CHD8-210ENST00000555962 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
CHD8-210ENST00000555962 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
CHD8-210ENST00000555962 GRIN3BO60391 1043 aa11.3□□□□□ -0.6
CHD8-210ENST00000555962 CSF1RP07333 972 aa11.3□□□□□ -0.6
CHD8-210ENST00000555962 GRAPQ13588 217 aa11.3□□□□□ -0.6
CHD8-210ENST00000555962 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
CHD8-210ENST00000555962 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
CHD8-210ENST00000555962 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
CHD8-210ENST00000555962 PANK1Q8TE04 598 aa11.3□□□□□ -0.6
CHD8-210ENST00000555962 MEIS3Q99687 375 aa11.3□□□□□ -0.6
CHD8-210ENST00000555962 RTL9Q8NET4 1388 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 NFKBIEO00221 500 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
CHD8-210ENST00000555962 PRELPP51888 382 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 LMBR1LQ6UX01 489 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 ANKRD44Q8N8A2 993 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
CHD8-210ENST00000555962 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
CHD8-210ENST00000555962 BBOX1O75936 387 aa11.28□□□□□ -0.6
CHD8-210ENST00000555962 RASSF7Q02833 373 aa11.28□□□□□ -0.6
CHD8-210ENST00000555962 FTSJ3Q8IY81 847 aaKnown RBP11.28□□□□□ -0.6
CHD8-210ENST00000555962 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
CHD8-210ENST00000555962 ATP6V0A2Q9Y487 856 aa11.28□□□□□ -0.6
CHD8-210ENST00000555962 UBTFL1P0CB47 393 aaPredicted RBP11.27□□□□□ -0.61
CHD8-210ENST00000555962 ITGA6P23229 1130 aa11.27□□□□□ -0.61
CHD8-210ENST00000555962 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
CHD8-210ENST00000555962 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
CHD8-210ENST00000555962 CCDC93Q567U6 631 aa11.27□□□□□ -0.61
CHD8-210ENST00000555962 C20orf194Q5TEA3 1177 aa11.27□□□□□ -0.61
CHD8-210ENST00000555962 SP8Q8IXZ3 490 aa11.27□□□□□ -0.61
CHD8-210ENST00000555962 LRRFIP2Q9Y608 721 aaKnown RBP11.27□□□□□ -0.61
CHD8-210ENST00000555962 ITPRIPQ8IWB1 547 aa11.26□□□□□ -0.61
CHD8-210ENST00000555962 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
CHD8-210ENST00000555962 CHMP3Q9Y3E7 222 aa11.26□□□□□ -0.61
CHD8-210ENST00000555962 COL4A5P29400 1685 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 ANKRD18BA2A2Z9 1011 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
CHD8-210ENST00000555962 GNAI3P08754 354 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
CHD8-210ENST00000555962 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 LTBP3Q9NS15 1303 aa11.25□□□□□ -0.61
CHD8-210ENST00000555962 MS4A1P11836 297 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
CHD8-210ENST00000555962 GPSM2P81274 684 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms