RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 CHPF2Q9P2E5 772 aa24.87■■□□□ 1.57
SUPT16H-203ENST00000555752 SLC10A3P09131 477 aa24.86■■□□□ 1.57
SUPT16H-203ENST00000555752 RPS12P25398 132 aaKnown RBP24.86■■□□□ 1.57
SUPT16H-203ENST00000555752 SF3B3Q15393 1217 aaKnown RBP24.86■■□□□ 1.57
SUPT16H-203ENST00000555752 TBC1D16Q8TBP0 767 aa24.85■■□□□ 1.57
SUPT16H-203ENST00000555752 BABAM1Q9NWV8 329 aa24.85■■□□□ 1.57
SUPT16H-203ENST00000555752 CDCA5Q96FF9 252 aa24.84■■□□□ 1.57
SUPT16H-203ENST00000555752 ISCA1Q9BUE6 129 aa24.84■■□□□ 1.57
SUPT16H-203ENST00000555752 TMPOP42166 694 aaKnown RBP24.83■■□□□ 1.57
SUPT16H-203ENST00000555752 SULF1Q8IWU6 871 aa24.83■■□□□ 1.57
SUPT16H-203ENST00000555752 PLBD2Q8NHP8 589 aa24.83■■□□□ 1.57
SUPT16H-203ENST00000555752 EYA3Q99504 573 aa24.82■■□□□ 1.56
SUPT16H-203ENST00000555752 VIL1P09327 827 aaKnown RBP24.81■■□□□ 1.56
SUPT16H-203ENST00000555752 ANKRD13DQ6ZTN6 518 aa24.81■■□□□ 1.56
SUPT16H-203ENST00000555752 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
SUPT16H-203ENST00000555752 NEUROD2Q15784 382 aa24.8■■□□□ 1.56
SUPT16H-203ENST00000555752 CTU1Q7Z7A3 348 aaKnown RBP24.8■■□□□ 1.56
SUPT16H-203ENST00000555752 RASAL3Q86YV0 1011 aa24.8■■□□□ 1.56
SUPT16H-203ENST00000555752 SCAF8Q9UPN6 1271 aaKnown RBP24.8■■□□□ 1.56
SUPT16H-203ENST00000555752 CHL1O00533 1208 aa24.79■■□□□ 1.56
SUPT16H-203ENST00000555752 RPS8P62241 208 aaKnown RBP24.79■■□□□ 1.56
SUPT16H-203ENST00000555752 ANGEL2Q5VTE6 544 aaKnown RBP24.79■■□□□ 1.56
SUPT16H-203ENST00000555752 ZC3H12CQ9C0D7 883 aaKnown RBP24.79■■□□□ 1.56
SUPT16H-203ENST00000555752 SEC31BQ9NQW1 1179 aa24.79■■□□□ 1.56
SUPT16H-203ENST00000555752 IRS4O14654 1257 aaPredicted RBP24.78■■□□□ 1.56
SUPT16H-203ENST00000555752 SCARF1Q14162 830 aa24.78■■□□□ 1.56
SUPT16H-203ENST00000555752 HDGFL1Q5TGJ6 251 aa24.78■■□□□ 1.56
SUPT16H-203ENST00000555752 MOB2Q70IA6 237 aa24.78■■□□□ 1.56
SUPT16H-203ENST00000555752 UFL1O94874 794 aa24.77■■□□□ 1.56
SUPT16H-203ENST00000555752 LMOD3Q0VAK6 560 aa24.77■■□□□ 1.56
SUPT16H-203ENST00000555752 CCDC146Q8IYE0 955 aa24.77■■□□□ 1.56
SUPT16H-203ENST00000555752 HPS5Q9UPZ3 1129 aa24.76■■□□□ 1.55
SUPT16H-203ENST00000555752 G3V3G9 751 aa24.75■■□□□ 1.55
SUPT16H-203ENST00000555752 ZNF280AP59817 542 aaPredicted RBP24.75■■□□□ 1.55
SUPT16H-203ENST00000555752 DCAF8Q5TAQ9 597 aa24.75■■□□□ 1.55
SUPT16H-203ENST00000555752 PODXL2Q9NZ53 605 aa24.75■■□□□ 1.55
SUPT16H-203ENST00000555752 RSBN1LQ6PCB5 846 aaPredicted RBP24.74■■□□□ 1.55
SUPT16H-203ENST00000555752 ANKIB1Q9P2G1 1089 aa24.74■■□□□ 1.55
SUPT16H-203ENST00000555752 PAPPA2Q9BXP8 1791 aa24.74■■□□□ 1.55
SUPT16H-203ENST00000555752 TBC1D8O95759 1140 aa24.73■■□□□ 1.55
SUPT16H-203ENST00000555752 PRAMEF18Q5VWM3 479 aa24.73■■□□□ 1.55
SUPT16H-203ENST00000555752 DBF4Q9UBU7 674 aaPredicted RBP24.73■■□□□ 1.55
SUPT16H-203ENST00000555752 GGA1Q9UJY5 639 aa24.73■■□□□ 1.55
SUPT16H-203ENST00000555752 TRIM35Q9UPQ4 493 aa24.73■■□□□ 1.55
SUPT16H-203ENST00000555752 PSME4Q14997 1843 aa24.72■■□□□ 1.55
SUPT16H-203ENST00000555752 PRPF38BQ5VTL8 546 aaKnown RBP24.72■■□□□ 1.55
SUPT16H-203ENST00000555752 JARID2Q92833 1246 aaPredicted RBP24.72■■□□□ 1.55
SUPT16H-203ENST00000555752 CCDC85AQ96PX6 553 aaPredicted RBP24.72■■□□□ 1.55
SUPT16H-203ENST00000555752 GMLQ99445 158 aa24.72■■□□□ 1.55
SUPT16H-203ENST00000555752 UBE2Q2LH0YL09 131 aa24.71■■□□□ 1.55
SUPT16H-203ENST00000555752 TRIM28Q13263 835 aaKnown RBP24.71■■□□□ 1.55
SUPT16H-203ENST00000555752 AGBL3Q8NEM8 1001 aa24.71■■□□□ 1.55
SUPT16H-203ENST00000555752 ZNF296Q8WUU4 475 aaPredicted RBP24.71■■□□□ 1.55
SUPT16H-203ENST00000555752 MYOZ2Q9NPC6 264 aa24.71■■□□□ 1.55
SUPT16H-203ENST00000555752 ZNF609O15014 1411 aa24.7■■□□□ 1.55
SUPT16H-203ENST00000555752 WTIPA6NIX2 430 aaPredicted RBP24.7■■□□□ 1.54
SUPT16H-203ENST00000555752 REM2Q8IYK8 340 aaPredicted RBP24.7■■□□□ 1.54
SUPT16H-203ENST00000555752 ZBTB38Q8NAP3 1195 aaPredicted RBP24.7■■□□□ 1.54
SUPT16H-203ENST00000555752 USP17L8P0C7I0 530 aa24.69■■□□□ 1.54
SUPT16H-203ENST00000555752 HYPKQ9NX55 129 aa24.69■■□□□ 1.54
SUPT16H-203ENST00000555752 HOXB7P09629 217 aa24.68■■□□□ 1.54
SUPT16H-203ENST00000555752 FKBP1BP68106 108 aa24.68■■□□□ 1.54
SUPT16H-203ENST00000555752 DUSP27Q5VZP5 1158 aa24.68■■□□□ 1.54
SUPT16H-203ENST00000555752 HDAC9Q9UKV0 1011 aa24.68■■□□□ 1.54
SUPT16H-203ENST00000555752 MKRN3Q13064 507 aaKnown RBP24.67■■□□□ 1.54
SUPT16H-203ENST00000555752 RIC3Q7Z5B4 369 aa24.67■■□□□ 1.54
SUPT16H-203ENST00000555752 MXD3Q9BW11 206 aa24.67■■□□□ 1.54
SUPT16H-203ENST00000555752 PHAXQ9H814 394 aaKnown RBP24.67■■□□□ 1.54
SUPT16H-203ENST00000555752 NBPF9Q3BBW0 867 aa24.66■■□□□ 1.54
SUPT16H-203ENST00000555752 MYD88Q99836 296 aa24.66■■□□□ 1.54
SUPT16H-203ENST00000555752 PITPNM2Q9BZ72 1349 aa24.65■■□□□ 1.54
SUPT16H-203ENST00000555752 USP17L3A6NCW0 530 aa24.64■■□□□ 1.54
SUPT16H-203ENST00000555752 USP17L4A6NCW7 530 aa24.64■■□□□ 1.54
SUPT16H-203ENST00000555752 PKN2Q16513 984 aaKnown RBP24.64■■□□□ 1.54
SUPT16H-203ENST00000555752 CCDC152Q4G0S7 254 aa24.64■■□□□ 1.54
SUPT16H-203ENST00000555752 USP17L1Q7RTZ2 530 aa24.64■■□□□ 1.54
SUPT16H-203ENST00000555752 XDHP47989 1333 aa24.63■■□□□ 1.53
SUPT16H-203ENST00000555752 GOLGA2Q08379 1002 aa24.63■■□□□ 1.53
SUPT16H-203ENST00000555752 TTLL12Q14166 644 aaPredicted RBP24.63■■□□□ 1.53
SUPT16H-203ENST00000555752 R3HDMLQ9H3Y0 253 aa24.63■■□□□ 1.53
SUPT16H-203ENST00000555752 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
SUPT16H-203ENST00000555752 ZNF646O15015 1829 aaPredicted RBP24.63■■□□□ 1.53
SUPT16H-203ENST00000555752 GPR25O00155 361 aa24.62■■□□□ 1.53
SUPT16H-203ENST00000555752 PDE8AO60658 829 aa24.62■■□□□ 1.53
SUPT16H-203ENST00000555752 PCCAP05165 728 aaPredicted RBP24.62■■□□□ 1.53
SUPT16H-203ENST00000555752 ANKRD18AQ8IVF6 992 aa24.62■■□□□ 1.53
SUPT16H-203ENST00000555752 ATP2B4P23634 1241 aa24.61■■□□□ 1.53
SUPT16H-203ENST00000555752 TM4SF4P48230 202 aa24.61■■□□□ 1.53
SUPT16H-203ENST00000555752 RUNDC1Q96C34 613 aa24.61■■□□□ 1.53
SUPT16H-203ENST00000555752 ELL2O00472 640 aaPredicted RBP24.6■■□□□ 1.53
SUPT16H-203ENST00000555752 PODNQ7Z5L7 613 aa24.6■■□□□ 1.53
SUPT16H-203ENST00000555752 SPEF2Q9C093 1822 aa24.6■■□□□ 1.53
SUPT16H-203ENST00000555752 SASH1O94885 1247 aa24.59■■□□□ 1.53
SUPT16H-203ENST00000555752 PRKG1Q13976 671 aa24.59■■□□□ 1.53
SUPT16H-203ENST00000555752 RALBP1Q15311 655 aa24.59■■□□□ 1.53
SUPT16H-203ENST00000555752 DACT2Q5SW24 774 aa24.59■■□□□ 1.53
SUPT16H-203ENST00000555752 CCDC191Q8NCU4 936 aa24.59■■□□□ 1.53
SUPT16H-203ENST00000555752 FBXW7Q969H0 707 aa24.59■■□□□ 1.53
SUPT16H-203ENST00000555752 WNT10BO00744 389 aa24.58■■□□□ 1.53
SUPT16H-203ENST00000555752 HSP90B1P14625 803 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms