RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
PCNX4-210ENST00000555740 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
PCNX4-210ENST00000555740 DLEC1Q9Y238 1755 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 LRRC37AA6NMS7 1700 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 CARMIL3Q8ND23 1372 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 NTSR2O95665 410 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 SSH3Q8TE77 659 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 C9orf78Q9NZ63 289 aaPredicted RBP9.72□□□□□ -0.85
PCNX4-210ENST00000555740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
PCNX4-210ENST00000555740 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
PCNX4-210ENST00000555740 SF3B2Q13435 895 aaKnown RBP9.72□□□□□ -0.85
PCNX4-210ENST00000555740 ZNF330Q9Y3S2 320 aaPredicted RBP9.72□□□□□ -0.85
PCNX4-210ENST00000555740 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.85
PCNX4-210ENST00000555740 SPEF2Q9C093 1822 aa9.71□□□□□ -0.85
PCNX4-210ENST00000555740 HMMRO75330 724 aa9.71□□□□□ -0.85
PCNX4-210ENST00000555740 IGHDP01880 384 aa9.71□□□□□ -0.85
PCNX4-210ENST00000555740 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.85
PCNX4-210ENST00000555740 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.86
PCNX4-210ENST00000555740 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.86
PCNX4-210ENST00000555740 UBE3BQ7Z3V4 1068 aa9.71□□□□□ -0.86
PCNX4-210ENST00000555740 GCC1Q96CN9 775 aa9.71□□□□□ -0.86
PCNX4-210ENST00000555740 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.86
PCNX4-210ENST00000555740 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.86
PCNX4-210ENST00000555740 COL11A2P13942 1736 aaPredicted RBP9.7□□□□□ -0.86
PCNX4-210ENST00000555740 ZPR1O75312 459 aa9.7□□□□□ -0.86
PCNX4-210ENST00000555740 FOXO4P98177 505 aa9.7□□□□□ -0.86
PCNX4-210ENST00000555740 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
PCNX4-210ENST00000555740 DCTPP1Q9H773 170 aa9.7□□□□□ -0.86
PCNX4-210ENST00000555740 SRP68Q9UHB9 627 aaKnown RBP9.7□□□□□ -0.86
PCNX4-210ENST00000555740 GYS1P13807 737 aa9.7□□□□□ -0.86
PCNX4-210ENST00000555740 RFC4P35249 363 aa9.7□□□□□ -0.86
PCNX4-210ENST00000555740 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 HSP90B1P14625 803 aaKnown RBP9.69□□□□□ -0.86
PCNX4-210ENST00000555740 PTGDRQ13258 359 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 PPP1R42Q7Z4L9 355 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 UTP14AQ9BVJ6 771 aaKnown RBP9.69□□□□□ -0.86
PCNX4-210ENST00000555740 TMEM121BQ9BXQ6 578 aaPredicted RBP9.69□□□□□ -0.86
PCNX4-210ENST00000555740 NYXQ9GZU5 481 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
PCNX4-210ENST00000555740 STK32BQ9NY57 414 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 NOP58Q9Y2X3 529 aaKnown RBP9.69□□□□□ -0.86
PCNX4-210ENST00000555740 ABCC12Q96J65 1359 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 KIAA1551Q9HCM1 1747 aa9.69□□□□□ -0.86
PCNX4-210ENST00000555740 CSF1RP07333 972 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 RFX5P48382 616 aaPredicted RBP9.68□□□□□ -0.86
PCNX4-210ENST00000555740 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 EPHA10Q5JZY3 1008 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 SLC10A5Q5PT55 438 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 SUSD4Q5VX71 490 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
PCNX4-210ENST00000555740 PNMA6EA0A0J9YXQ4 647 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 GPTP24298 496 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 HIC1Q14526 733 aa9.68□□□□□ -0.86
PCNX4-210ENST00000555740 PHF14O94880 888 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 TM4SF1P30408 202 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
PCNX4-210ENST00000555740 COL4A1P02462 1669 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 CTSWP56202 376 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 NUCB1Q02818 461 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 NFIXQ14938 502 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 TFCP2L1Q9NZI6 479 aa9.67□□□□□ -0.86
PCNX4-210ENST00000555740 PDE8AO60658 829 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 DEFB132Q7Z7B7 95 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 TRMT112Q9UI30 125 aaKnown RBP9.66□□□□□ -0.86
PCNX4-210ENST00000555740 IRS4O14654 1257 aaPredicted RBP9.66□□□□□ -0.86
PCNX4-210ENST00000555740 SRGAP3O43295 1099 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 RAB11FIP3O75154 756 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
PCNX4-210ENST00000555740 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 HSP90AB4PQ58FF6 505 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 FAM89AQ96GI7 184 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
PCNX4-210ENST00000555740 CIAO1O76071 339 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 DDR1Q08345 913 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 SF3B3Q15393 1217 aaKnown RBP9.65□□□□□ -0.86
PCNX4-210ENST00000555740 NLGN1Q8N2Q7 840 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.86
PCNX4-210ENST00000555740 ERC1Q8IUD2 1116 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 POM121Q96HA1 1249 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 ZNF609O15014 1411 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 TSR1Q2NL82 804 aaKnown RBP9.64□□□□□ -0.87
PCNX4-210ENST00000555740 LMBR1LQ6UX01 489 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 TTLL11Q8NHH1 800 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 NPDC1Q9NQX5 325 aaPredicted RBP9.64□□□□□ -0.87
PCNX4-210ENST00000555740 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 SALL3Q9BXA9 1300 aa9.64□□□□□ -0.87
PCNX4-210ENST00000555740 BRCA1P38398 1863 aaKnown RBP9.63□□□□□ -0.87
PCNX4-210ENST00000555740 KLRG2A4D1S0 409 aaPredicted RBP9.63□□□□□ -0.87
PCNX4-210ENST00000555740 EVI5O60447 810 aa9.63□□□□□ -0.87
PCNX4-210ENST00000555740 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
PCNX4-210ENST00000555740 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms