RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 TNNQ9UQP3 1299 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 ARFGEF1Q9Y6D6 1849 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 SNED1Q8TER0 1413 aa8.2□□□□□ -1.1
PRKCH-217ENST00000555604 EYA2O00167 538 aa8.2□□□□□ -1.1
PRKCH-217ENST00000555604 NFKBIEO00221 500 aa8.2□□□□□ -1.1
PRKCH-217ENST00000555604 IL15P40933 162 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-217ENST00000555604 RFX5P48382 616 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-217ENST00000555604 PTPN12Q05209 780 aaKnown RBP8.2□□□□□ -1.1
PRKCH-217ENST00000555604 C15orf52Q6ZUT6 534 aaKnown RBP8.2□□□□□ -1.1
PRKCH-217ENST00000555604 SSH3Q8TE77 659 aa8.2□□□□□ -1.1
PRKCH-217ENST00000555604 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
PRKCH-217ENST00000555604 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
PRKCH-217ENST00000555604 RIPOR2Q9Y4F9 1068 aa8.2□□□□□ -1.1
PRKCH-217ENST00000555604 PDE8BO95263 885 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 IARSP41252 1262 aaKnown RBP8.19□□□□□ -1.1
PRKCH-217ENST00000555604 GPSM2P81274 684 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 CHRNDQ07001 517 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 KIAA2012Q0VF49 1180 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 UBE4AQ14139 1066 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 POLA2Q14181 598 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 WASHC4Q2M389 1173 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 C20orf194Q5TEA3 1177 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 CEP85Q6P2H3 762 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 TBC1D16Q8TBP0 767 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 ZNF219Q9P2Y4 722 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-217ENST00000555604 AKAP2Q9Y2D5 859 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 NOP58Q9Y2X3 529 aaKnown RBP8.19□□□□□ -1.1
PRKCH-217ENST00000555604 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
PRKCH-217ENST00000555604 MYH3P11055 1940 aa8.19□□□□□ -1.1
PRKCH-217ENST00000555604 SLX4Q8IY92 1834 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 C6orf229H3BNL8 230 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 ZBTB22O15209 634 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 UFL1O94874 794 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 KCNJ4P48050 445 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 MMP14P50281 582 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 G3BP1Q13283 466 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRKCH-217ENST00000555604 METTL24Q5JXM2 366 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 C9orf131Q5VYM1 1079 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 PODNQ7Z5L7 613 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 NIM1KQ8IY84 436 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 RNF181Q9P0P0 153 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 POLLQ9UGP5 575 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 WWC3Q9ULE0 1092 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 ZNF804BA4D1E1 1349 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 MED23Q9ULK4 1368 aa8.18□□□□□ -1.1
PRKCH-217ENST00000555604 LRRC37AA6NMS7 1700 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 G3V3G9 751 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 FZD9O00144 591 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 IFIT1P09914 478 aaKnown RBP8.17□□□□□ -1.1
PRKCH-217ENST00000555604 PUM3Q15397 648 aaKnown RBP8.17□□□□□ -1.1
PRKCH-217ENST00000555604 CAVIN4Q5BKX8 364 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 DCAF8Q5TAQ9 597 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 ZNF594Q96JF6 807 aaPredicted RBP8.17□□□□□ -1.1
PRKCH-217ENST00000555604 COA1Q9GZY4 146 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 GPR108Q9NPR9 543 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 ZNF277Q9NRM2 450 aaPredicted RBP8.17□□□□□ -1.1
PRKCH-217ENST00000555604 ZNRF3Q9ULT6 936 aa8.17□□□□□ -1.1
PRKCH-217ENST00000555604 PNMA6EA0A0J9YXQ4 647 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 SURF6O75683 361 aaKnown RBP8.16□□□□□ -1.1
PRKCH-217ENST00000555604 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
PRKCH-217ENST00000555604 RASSF7Q02833 373 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 TNIP1Q15025 636 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 OLFM4Q6UX06 510 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 ATG9AQ7Z3C6 839 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 VGLL2Q8N8G2 317 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 KDM2BQ8NHM5 1336 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 LPIN2Q92539 896 aa8.16□□□□□ -1.1
PRKCH-217ENST00000555604 FER1L6Q2WGJ9 1857 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 GLTPD2A6NH11 291 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 IGSF3O75054 1194 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 SLC5A1P13866 664 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 HDAC1Q13547 482 aaPredicted RBP8.15□□□□□ -1.1
PRKCH-217ENST00000555604 AOC3Q16853 763 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 GPC2Q8N158 579 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 KLHDC4Q8TBB5 520 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 CRBNQ96SW2 442 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 PUS3Q9BZE2 481 aaKnown RBP8.15□□□□□ -1.1
PRKCH-217ENST00000555604 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
PRKCH-217ENST00000555604 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
PRKCH-217ENST00000555604 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 SEMA3EO15041 775 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 TAF5LO75529 589 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 IL1R1P14778 569 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 FGFR2P21802 821 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 RPS12P25398 132 aaKnown RBP8.14□□□□□ -1.11
PRKCH-217ENST00000555604 YY1P25490 414 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 HIBADHP31937 336 aaKnown RBP8.14□□□□□ -1.11
PRKCH-217ENST00000555604 FKBP1AP62942 108 aaKnown RBP8.14□□□□□ -1.11
PRKCH-217ENST00000555604 OS9Q13438 667 aaPredicted RBP8.14□□□□□ -1.11
PRKCH-217ENST00000555604 ATP2B3Q16720 1220 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
PRKCH-217ENST00000555604 VPS37DQ86XT2 251 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms