RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ANKIB1Q9P2G1 1089 aa25.99■■□□□ 1.75
VTI1B-205ENST00000555543 HACL1Q9UJ83 578 aa25.99■■□□□ 1.75
VTI1B-205ENST00000555543 BSDC1Q9NW68 430 aaPredicted RBP25.98■■□□□ 1.75
VTI1B-205ENST00000555543 SCNN1DP51172 638 aa25.97■■□□□ 1.75
VTI1B-205ENST00000555543 DBNDD1Q9H9R9 158 aa25.97■■□□□ 1.75
VTI1B-205ENST00000555543 C9orf78Q9NZ63 289 aaPredicted RBP25.97■■□□□ 1.75
VTI1B-205ENST00000555543 GGA1Q9UJY5 639 aa25.97■■□□□ 1.75
VTI1B-205ENST00000555543 ADAMTSL1Q8N6G6 1762 aa25.97■■□□□ 1.75
VTI1B-205ENST00000555543 XDHP47989 1333 aa25.96■■□□□ 1.75
VTI1B-205ENST00000555543 RAD17O75943 681 aa25.96■■□□□ 1.75
VTI1B-205ENST00000555543 EPHX2P34913 555 aa25.96■■□□□ 1.75
VTI1B-205ENST00000555543 EYA3Q99504 573 aa25.96■■□□□ 1.75
VTI1B-205ENST00000555543 MINPP1Q9UNW1 487 aa25.96■■□□□ 1.75
VTI1B-205ENST00000555543 WTIPA6NIX2 430 aaPredicted RBP25.95■■□□□ 1.74
VTI1B-205ENST00000555543 NBPF7P0C2Y1 421 aaPredicted RBP25.95■■□□□ 1.74
VTI1B-205ENST00000555543 IGHMBP2P38935 993 aaKnown RBP25.94■■□□□ 1.74
VTI1B-205ENST00000555543 RARSP54136 660 aaKnown RBP25.94■■□□□ 1.74
VTI1B-205ENST00000555543 DOK7Q18PE1 504 aa25.94■■□□□ 1.74
VTI1B-205ENST00000555543 CIAPIN1Q6FI81 312 aa25.94■■□□□ 1.74
VTI1B-205ENST00000555543 LMBR1LQ6UX01 489 aa25.94■■□□□ 1.74
VTI1B-205ENST00000555543 SUCLG2Q96I99 432 aa25.94■■□□□ 1.74
VTI1B-205ENST00000555543 UTYO14607 1347 aa25.93■■□□□ 1.74
VTI1B-205ENST00000555543 EPS15P42566 896 aa25.93■■□□□ 1.74
VTI1B-205ENST00000555543 EAPPQ56P03 285 aaPredicted RBP25.93■■□□□ 1.74
VTI1B-205ENST00000555543 CHADLQ6NUI6 762 aa25.93■■□□□ 1.74
VTI1B-205ENST00000555543 KAZALD1Q96I82 304 aa25.93■■□□□ 1.74
VTI1B-205ENST00000555543 CHMP3Q9Y3E7 222 aa25.93■■□□□ 1.74
VTI1B-205ENST00000555543 ANKRD18BA2A2Z9 1011 aa25.92■■□□□ 1.74
VTI1B-205ENST00000555543 ECE2O60344 883 aa25.92■■□□□ 1.74
VTI1B-205ENST00000555543 GMPSP49915 693 aaPredicted RBP25.92■■□□□ 1.74
VTI1B-205ENST00000555543 APLP1P51693 650 aa25.92■■□□□ 1.74
VTI1B-205ENST00000555543 LDHDQ86WU2 507 aa25.92■■□□□ 1.74
VTI1B-205ENST00000555543 NOB1Q9ULX3 412 aaKnown RBP25.92■■□□□ 1.74
VTI1B-205ENST00000555543 ATP2B4P23634 1241 aa25.91■■□□□ 1.74
VTI1B-205ENST00000555543 LMOD1P29536 600 aaPredicted RBP25.91■■□□□ 1.74
VTI1B-205ENST00000555543 BRPF1P55201 1214 aaPredicted RBP25.91■■□□□ 1.74
VTI1B-205ENST00000555543 ZC3H12CQ9C0D7 883 aaKnown RBP25.91■■□□□ 1.74
VTI1B-205ENST00000555543 KCNQ5Q9NR82 932 aa25.91■■□□□ 1.74
VTI1B-205ENST00000555543 SCN9AQ15858 1988 aa25.91■■□□□ 1.74
VTI1B-205ENST00000555543 HTRA3P83110 453 aa25.9■■□□□ 1.74
VTI1B-205ENST00000555543 IFIT5Q13325 482 aaKnown RBP25.9■■□□□ 1.74
VTI1B-205ENST00000555543 MPHOSPH8Q99549 860 aa25.9■■□□□ 1.74
VTI1B-205ENST00000555543 GPRC5DQ9NZD1 345 aa25.9■■□□□ 1.74
VTI1B-205ENST00000555543 PSMD14O00487 310 aa25.89■■□□□ 1.74
VTI1B-205ENST00000555543 CCT4P50991 539 aaKnown RBP25.89■■□□□ 1.74
VTI1B-205ENST00000555543 TNIP1Q15025 636 aa25.89■■□□□ 1.74
VTI1B-205ENST00000555543 PNMA8AQ86V59 439 aaPredicted RBP25.89■■□□□ 1.74
VTI1B-205ENST00000555543 A0A1B0GUL6 1792 aa25.89■■□□□ 1.73
VTI1B-205ENST00000555543 USP44Q9H0E7 712 aa25.88■■□□□ 1.73
VTI1B-205ENST00000555543 MED23Q9ULK4 1368 aa25.87■■□□□ 1.73
VTI1B-205ENST00000555543 ZNF594Q96JF6 807 aaPredicted RBP25.87■■□□□ 1.73
VTI1B-205ENST00000555543 BICC1Q9H694 974 aaKnown RBP25.87■■□□□ 1.73
VTI1B-205ENST00000555543 ZBTB12Q9Y330 459 aaPredicted RBP25.87■■□□□ 1.73
VTI1B-205ENST00000555543 SHTN1A0MZ66 631 aa25.86■■□□□ 1.73
VTI1B-205ENST00000555543 CHRNDQ07001 517 aa25.86■■□□□ 1.73
VTI1B-205ENST00000555543 ANKRD44Q8N8A2 993 aa25.86■■□□□ 1.73
VTI1B-205ENST00000555543 CLEC11AQ9Y240 323 aa25.86■■□□□ 1.73
VTI1B-205ENST00000555543 ZBED9Q6R2W3 1325 aa25.86■■□□□ 1.73
VTI1B-205ENST00000555543 KLRK1P26718 216 aa25.85■■□□□ 1.73
VTI1B-205ENST00000555543 CCDC57Q2TAC2 916 aa25.85■■□□□ 1.73
VTI1B-205ENST00000555543 KIF16BQ96L93 1317 aa25.85■■□□□ 1.73
VTI1B-205ENST00000555543 RABL6Q3YEC7 729 aaPredicted RBP25.84■■□□□ 1.73
VTI1B-205ENST00000555543 MAP1SQ66K74 1059 aaPredicted RBP25.84■■□□□ 1.73
VTI1B-205ENST00000555543 TXNRD3Q86VQ6 643 aa25.84■■□□□ 1.73
VTI1B-205ENST00000555543 API5Q9BZZ5 524 aaKnown RBP25.84■■□□□ 1.73
VTI1B-205ENST00000555543 ANKRD2Q9GZV1 360 aa25.84■■□□□ 1.73
VTI1B-205ENST00000555543 LEMD3Q9Y2U8 911 aa25.84■■□□□ 1.73
VTI1B-205ENST00000555543 G3V3G9 751 aa25.83■■□□□ 1.73
VTI1B-205ENST00000555543 SNAP23O00161 211 aa25.83■■□□□ 1.73
VTI1B-205ENST00000555543 DCAF8Q5TAQ9 597 aa25.83■■□□□ 1.73
VTI1B-205ENST00000555543 USP50Q70EL3 339 aaPredicted RBP25.83■■□□□ 1.73
VTI1B-205ENST00000555543 HELBQ8NG08 1087 aaPredicted RBP25.83■■□□□ 1.73
VTI1B-205ENST00000555543 ADARB2Q9NS39 739 aaKnown RBP25.83■■□□□ 1.73
VTI1B-205ENST00000555543 PSME4Q14997 1843 aa25.83■■□□□ 1.73
VTI1B-205ENST00000555543 ZNF804BA4D1E1 1349 aa25.83■■□□□ 1.73
VTI1B-205ENST00000555543 BCAR3O75815 825 aa25.82■■□□□ 1.72
VTI1B-205ENST00000555543 ITGBL1O95965 494 aaPredicted RBP25.82■■□□□ 1.72
VTI1B-205ENST00000555543 TAF7LQ5H9L4 462 aa25.82■■□□□ 1.72
VTI1B-205ENST00000555543 PASKQ96RG2 1323 aa25.82■■□□□ 1.72
VTI1B-205ENST00000555543 TAF5LO75529 589 aa25.81■■□□□ 1.72
VTI1B-205ENST00000555543 LDHAL6AQ6ZMR3 332 aa25.81■■□□□ 1.72
VTI1B-205ENST00000555543 MICALL2Q8IY33 904 aa25.81■■□□□ 1.72
VTI1B-205ENST00000555543 DNAJC5GQ8N7S2 189 aa25.81■■□□□ 1.72
VTI1B-205ENST00000555543 TRPM4Q8TD43 1214 aa25.81■■□□□ 1.72
VTI1B-205ENST00000555543 CNOT7Q9UIV1 285 aaKnown RBP25.81■■□□□ 1.72
VTI1B-205ENST00000555543 ZNF646O15015 1829 aaPredicted RBP25.8■■□□□ 1.72
VTI1B-205ENST00000555543 VIL1P09327 827 aaKnown RBP25.8■■□□□ 1.72
VTI1B-205ENST00000555543 ARHGAP45Q92619 1136 aa25.8■■□□□ 1.72
VTI1B-205ENST00000555543 DPF2Q92785 391 aa25.8■■□□□ 1.72
VTI1B-205ENST00000555543 IRS2Q9Y4H2 1338 aa25.8■■□□□ 1.72
VTI1B-205ENST00000555543 HIRAP54198 1017 aaPredicted RBP25.79■■□□□ 1.72
VTI1B-205ENST00000555543 CNTROBQ8N137 903 aa25.79■■□□□ 1.72
VTI1B-205ENST00000555543 PUS3Q9BZE2 481 aaKnown RBP25.79■■□□□ 1.72
VTI1B-205ENST00000555543 CNNM1Q9NRU3 951 aa25.79■■□□□ 1.72
VTI1B-205ENST00000555543 TNNQ9UQP3 1299 aa25.79■■□□□ 1.72
VTI1B-205ENST00000555543 RPS12P25398 132 aaKnown RBP25.78■■□□□ 1.72
VTI1B-205ENST00000555543 KCNJ4P48050 445 aa25.78■■□□□ 1.72
VTI1B-205ENST00000555543 PODNQ7Z5L7 613 aa25.78■■□□□ 1.72
VTI1B-205ENST00000555543 EGFRP00533 1210 aa25.77■■□□□ 1.72
VTI1B-205ENST00000555543 TRIM27P14373 513 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms