RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 PRAMEF18Q5VWM3 479 aa11.03□□□□□ -0.64
NEK9-206ENST00000555537 ZNF296Q8WUU4 475 aaPredicted RBP11.03□□□□□ -0.64
NEK9-206ENST00000555537 HDAC9Q9UKV0 1011 aa11.03□□□□□ -0.64
NEK9-206ENST00000555537 COL4A1P02462 1669 aa11.03□□□□□ -0.64
NEK9-206ENST00000555537 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
NEK9-206ENST00000555537 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
NEK9-206ENST00000555537 UBE2Q2LH0YL09 131 aa11.02□□□□□ -0.65
NEK9-206ENST00000555537 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.65
NEK9-206ENST00000555537 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
NEK9-206ENST00000555537 KRT24Q2M2I5 525 aa11.02□□□□□ -0.65
NEK9-206ENST00000555537 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
NEK9-206ENST00000555537 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
NEK9-206ENST00000555537 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
NEK9-206ENST00000555537 SF3B3Q15393 1217 aaKnown RBP11.01□□□□□ -0.65
NEK9-206ENST00000555537 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
NEK9-206ENST00000555537 G3V3G9 751 aa11□□□□□ -0.65
NEK9-206ENST00000555537 RIPK4P57078 832 aa11□□□□□ -0.65
NEK9-206ENST00000555537 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
NEK9-206ENST00000555537 EYA3Q99504 573 aa11□□□□□ -0.65
NEK9-206ENST00000555537 R3HDMLQ9H3Y0 253 aa11□□□□□ -0.65
NEK9-206ENST00000555537 PDE4DIPQ5VU43 2346 aa11□□□□□ -0.65
NEK9-206ENST00000555537 GPR25O00155 361 aa10.99□□□□□ -0.65
NEK9-206ENST00000555537 RPS8P62241 208 aaKnown RBP10.99□□□□□ -0.65
NEK9-206ENST00000555537 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
NEK9-206ENST00000555537 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
NEK9-206ENST00000555537 ISCA1Q9BUE6 129 aa10.99□□□□□ -0.65
NEK9-206ENST00000555537 SEC31BQ9NQW1 1179 aa10.99□□□□□ -0.65
NEK9-206ENST00000555537 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
NEK9-206ENST00000555537 MAPK8IP3Q9UPT6 1336 aa10.99□□□□□ -0.65
NEK9-206ENST00000555537 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
NEK9-206ENST00000555537 SCN9AQ15858 1988 aa10.98□□□□□ -0.65
NEK9-206ENST00000555537 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 UFL1O94874 794 aa10.98□□□□□ -0.65
NEK9-206ENST00000555537 ZNF280AP59817 542 aaPredicted RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 RSBN1LQ6PCB5 846 aaPredicted RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
NEK9-206ENST00000555537 JARID2Q92833 1246 aaPredicted RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 ANKIB1Q9P2G1 1089 aa10.98□□□□□ -0.65
NEK9-206ENST00000555537 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 DDX60Q8IY21 1712 aaKnown RBP10.98□□□□□ -0.65
NEK9-206ENST00000555537 IRS4O14654 1257 aaPredicted RBP10.97□□□□□ -0.65
NEK9-206ENST00000555537 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 TM4SF4P48230 202 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 PRKG1Q13976 671 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 NBPF9Q3BBW0 867 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 FBXO46Q6PJ61 603 aaPredicted RBP10.97□□□□□ -0.65
NEK9-206ENST00000555537 PLBD2Q8NHP8 589 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
NEK9-206ENST00000555537 GMLQ99445 158 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 MXD3Q9BW11 206 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 MYOZ2Q9NPC6 264 aa10.97□□□□□ -0.65
NEK9-206ENST00000555537 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
NEK9-206ENST00000555537 FKBP1BP68106 108 aa10.96□□□□□ -0.65
NEK9-206ENST00000555537 NEUROD2Q15784 382 aa10.96□□□□□ -0.65
NEK9-206ENST00000555537 HABP4Q5JVS0 413 aaKnown RBP10.96□□□□□ -0.65
NEK9-206ENST00000555537 AGBL3Q8NEM8 1001 aa10.96□□□□□ -0.65
NEK9-206ENST00000555537 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
NEK9-206ENST00000555537 GGA1Q9UJY5 639 aa10.96□□□□□ -0.65
NEK9-206ENST00000555537 POTEFA5A3E0 1075 aa10.95□□□□□ -0.66
NEK9-206ENST00000555537 FKTNO75072 461 aa10.95□□□□□ -0.66
NEK9-206ENST00000555537 PTPN12Q05209 780 aaKnown RBP10.95□□□□□ -0.66
NEK9-206ENST00000555537 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
NEK9-206ENST00000555537 FZD1Q9UP38 647 aa10.95□□□□□ -0.66
NEK9-206ENST00000555537 USP17L3A6NCW0 530 aa10.94□□□□□ -0.66
NEK9-206ENST00000555537 USP17L4A6NCW7 530 aa10.94□□□□□ -0.66
NEK9-206ENST00000555537 TMPOP42166 694 aaKnown RBP10.94□□□□□ -0.66
NEK9-206ENST00000555537 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
NEK9-206ENST00000555537 USP17L1Q7RTZ2 530 aa10.94□□□□□ -0.66
NEK9-206ENST00000555537 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
NEK9-206ENST00000555537 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
NEK9-206ENST00000555537 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
NEK9-206ENST00000555537 CHL1O00533 1208 aa10.93□□□□□ -0.66
NEK9-206ENST00000555537 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
NEK9-206ENST00000555537 GCC1Q96CN9 775 aa10.93□□□□□ -0.66
NEK9-206ENST00000555537 WNT10BO00744 389 aa10.92□□□□□ -0.66
NEK9-206ENST00000555537 SASH1O94885 1247 aa10.92□□□□□ -0.66
NEK9-206ENST00000555537 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
NEK9-206ENST00000555537 ZBTB38Q8NAP3 1195 aaPredicted RBP10.92□□□□□ -0.66
NEK9-206ENST00000555537 DBF4Q9UBU7 674 aaPredicted RBP10.92□□□□□ -0.66
NEK9-206ENST00000555537 TRIM17Q9Y577 477 aa10.92□□□□□ -0.66
NEK9-206ENST00000555537 SREBF2Q12772 1141 aa10.91□□□□□ -0.66
NEK9-206ENST00000555537 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
NEK9-206ENST00000555537 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
NEK9-206ENST00000555537 RIC3Q7Z5B4 369 aa10.91□□□□□ -0.66
NEK9-206ENST00000555537 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
NEK9-206ENST00000555537 MYD88Q99836 296 aa10.91□□□□□ -0.66
NEK9-206ENST00000555537 PHAXQ9H814 394 aaKnown RBP10.91□□□□□ -0.66
NEK9-206ENST00000555537 ANGEL1Q9UNK9 670 aaKnown RBP10.91□□□□□ -0.66
NEK9-206ENST00000555537 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.66
NEK9-206ENST00000555537 EN2P19622 333 aaPredicted RBP10.9□□□□□ -0.66
NEK9-206ENST00000555537 ATP2B4P23634 1241 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 NF2P35240 595 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 CCDC152Q4G0S7 254 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 DACT2Q5SW24 774 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 DUSP27Q5VZP5 1158 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 SPRYD7Q5W111 196 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 OTOP1Q7RTM1 612 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 ARMC9Q7Z3E5 817 aa10.9□□□□□ -0.66
NEK9-206ENST00000555537 ANKRD18AQ8IVF6 992 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms