RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 WASHC4Q2M389 1173 aa17.32■□□□□ 0.36
SNX6-203ENST00000555416 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
SNX6-203ENST00000555416 GPC2Q8N158 579 aa17.32■□□□□ 0.36
SNX6-203ENST00000555416 BSDC1Q9NW68 430 aaPredicted RBP17.32■□□□□ 0.36
SNX6-203ENST00000555416 ZNRF3Q9ULT6 936 aa17.32■□□□□ 0.36
SNX6-203ENST00000555416 UTYO14607 1347 aa17.31■□□□□ 0.36
SNX6-203ENST00000555416 UFL1O94874 794 aa17.31■□□□□ 0.36
SNX6-203ENST00000555416 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
SNX6-203ENST00000555416 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
SNX6-203ENST00000555416 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
SNX6-203ENST00000555416 KCNQ5Q9NR82 932 aa17.31■□□□□ 0.36
SNX6-203ENST00000555416 ANKIB1Q9P2G1 1089 aa17.31■□□□□ 0.36
SNX6-203ENST00000555416 BCAR3O75815 825 aa17.3■□□□□ 0.36
SNX6-203ENST00000555416 RAD17O75943 681 aa17.3■□□□□ 0.36
SNX6-203ENST00000555416 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
SNX6-203ENST00000555416 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
SNX6-203ENST00000555416 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
SNX6-203ENST00000555416 CEP350Q5VT06 3117 aa17.3■□□□□ 0.36
SNX6-203ENST00000555416 XDHP47989 1333 aa17.29■□□□□ 0.36
SNX6-203ENST00000555416 ZBED9Q6R2W3 1325 aa17.29■□□□□ 0.36
SNX6-203ENST00000555416 HSPA6P17066 643 aa17.29■□□□□ 0.36
SNX6-203ENST00000555416 SCNN1DP51172 638 aa17.29■□□□□ 0.36
SNX6-203ENST00000555416 ZNF594Q96JF6 807 aaPredicted RBP17.29■□□□□ 0.36
SNX6-203ENST00000555416 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
SNX6-203ENST00000555416 SCN4AP35499 1836 aa17.28■□□□□ 0.36
SNX6-203ENST00000555416 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
SNX6-203ENST00000555416 EPS15P42566 896 aa17.28■□□□□ 0.36
SNX6-203ENST00000555416 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
SNX6-203ENST00000555416 HACL1Q9UJ83 578 aa17.28■□□□□ 0.36
SNX6-203ENST00000555416 SHTN1A0MZ66 631 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 ANKRD18BA2A2Z9 1011 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 SNAP23O00161 211 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 ECE2O60344 883 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 EPHX2P34913 555 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 FSTL1Q12841 308 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 CIAPIN1Q6FI81 312 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 BICC1Q9H694 974 aaKnown RBP17.27■□□□□ 0.36
SNX6-203ENST00000555416 SCN9AQ15858 1988 aa17.27■□□□□ 0.36
SNX6-203ENST00000555416 KLRK1P26718 216 aa17.26■□□□□ 0.35
SNX6-203ENST00000555416 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
SNX6-203ENST00000555416 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
SNX6-203ENST00000555416 HTRA3P83110 453 aa17.26■□□□□ 0.35
SNX6-203ENST00000555416 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
SNX6-203ENST00000555416 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
SNX6-203ENST00000555416 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
SNX6-203ENST00000555416 EYA3Q99504 573 aa17.26■□□□□ 0.35
SNX6-203ENST00000555416 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
SNX6-203ENST00000555416 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
SNX6-203ENST00000555416 PSMD14O00487 310 aa17.25■□□□□ 0.35
SNX6-203ENST00000555416 ATP2B4P23634 1241 aa17.25■□□□□ 0.35
SNX6-203ENST00000555416 CHRNDQ07001 517 aa17.25■□□□□ 0.35
SNX6-203ENST00000555416 EAPPQ56P03 285 aaPredicted RBP17.25■□□□□ 0.35
SNX6-203ENST00000555416 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
SNX6-203ENST00000555416 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
SNX6-203ENST00000555416 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
SNX6-203ENST00000555416 TAF5LO75529 589 aa17.24■□□□□ 0.35
SNX6-203ENST00000555416 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
SNX6-203ENST00000555416 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
SNX6-203ENST00000555416 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
SNX6-203ENST00000555416 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
SNX6-203ENST00000555416 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
SNX6-203ENST00000555416 TRIM27P14373 513 aa17.23■□□□□ 0.35
SNX6-203ENST00000555416 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
SNX6-203ENST00000555416 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
SNX6-203ENST00000555416 ARHGAP45Q92619 1136 aa17.23■□□□□ 0.35
SNX6-203ENST00000555416 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
SNX6-203ENST00000555416 TNIP1Q15025 636 aa17.22■□□□□ 0.35
SNX6-203ENST00000555416 LDHDQ86WU2 507 aa17.22■□□□□ 0.35
SNX6-203ENST00000555416 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
SNX6-203ENST00000555416 MED23Q9ULK4 1368 aa17.22■□□□□ 0.35
SNX6-203ENST00000555416 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.35
SNX6-203ENST00000555416 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
SNX6-203ENST00000555416 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
SNX6-203ENST00000555416 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
SNX6-203ENST00000555416 MEIS3Q99687 375 aa17.21■□□□□ 0.35
SNX6-203ENST00000555416 ANKRD2Q9GZV1 360 aa17.21■□□□□ 0.35
SNX6-203ENST00000555416 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
SNX6-203ENST00000555416 PLIN1O60240 522 aa17.2■□□□□ 0.34
SNX6-203ENST00000555416 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
SNX6-203ENST00000555416 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
SNX6-203ENST00000555416 MAP1SQ66K74 1059 aaPredicted RBP17.2■□□□□ 0.34
SNX6-203ENST00000555416 INTS3Q68E01 1043 aaKnown RBP17.2■□□□□ 0.34
SNX6-203ENST00000555416 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
SNX6-203ENST00000555416 TRPM4Q8TD43 1214 aa17.2■□□□□ 0.34
SNX6-203ENST00000555416 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
SNX6-203ENST00000555416 CNOT7Q9UIV1 285 aaKnown RBP17.2■□□□□ 0.34
SNX6-203ENST00000555416 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
SNX6-203ENST00000555416 G3V3G9 751 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 ITGBL1O95965 494 aaPredicted RBP17.19■□□□□ 0.34
SNX6-203ENST00000555416 EGFRP00533 1210 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 VIL1P09327 827 aaKnown RBP17.19■□□□□ 0.34
SNX6-203ENST00000555416 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
SNX6-203ENST00000555416 APLP1P51693 650 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 DCAF8Q5TAQ9 597 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
SNX6-203ENST00000555416 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
SNX6-203ENST00000555416 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms