RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TUBB4AP04350 444 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 KCNJ4P48050 445 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 CABP4P57796 275 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 TERF2Q15554 542 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 TPD52L1Q16890 204 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 ANO6Q4KMQ2 910 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 CEP135Q66GS9 1140 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 HMG20BQ9P0W2 317 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 PARP4Q9UKK3 1724 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 GOLGA6L4A6NEF3 574 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 ATP5JP18859 108 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 LUZP1Q86V48 1076 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 FSD1Q9BTV5 496 aa12.57□□□□□ -0.4
MTHFD1-210ENST00000555252 SPATA31A3Q5VYP0 1347 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 VPS37CA5D8V6 355 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 CTAGE5O15320 804 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 CYP27B1O15528 508 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 LARGE1O95461 756 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 CLIP2Q9UDT6 1046 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 JCADQ9P266 1359 aa12.56□□□□□ -0.4
MTHFD1-210ENST00000555252 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 RFX5P48382 616 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 SLC20A2Q08357 652 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 TSGA10IPQ3SY00 556 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 MED23Q9ULK4 1368 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 SLC27A2O14975 620 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 LIG1P18858 919 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 ZNF165P49910 485 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 KRT32Q14532 448 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 FAM227BQ96M60 508 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 SIL1Q9H173 461 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 BOLA2Q9H3K6 86 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 DACT1Q9NYF0 836 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 CALCOCO1Q9P1Z2 691 aa12.55□□□□□ -0.4
MTHFD1-210ENST00000555252 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 LRMPQ12912 555 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 PTPN14Q15678 1187 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 ME3Q16798 604 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 ADCK5Q3MIX3 580 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 TNNI3KQ59H18 835 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 EPHA10Q5JZY3 1008 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 FPGT-TNNI3KV9GXZ4 949 aa12.54□□□□□ -0.4
MTHFD1-210ENST00000555252 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 BLOC1S2Q6QNY1 142 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 GOLGA6L19H0YKK7 550 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 KCNJ6P48051 423 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 GSDMDP57764 484 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
MTHFD1-210ENST00000555252 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 ZNF335Q9H4Z2 1342 aaPredicted RBP12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 A0A087WZG4 1122 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 A0A0D9SFI3 127 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 TIGD1Q96MW7 591 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 GPR108Q9NPR9 543 aa12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.4
MTHFD1-210ENST00000555252 AFDNP55196 1824 aaKnown RBP12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 SLU7O95391 586 aaKnown RBP12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 CPA1P15085 419 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 RPS6KB1P23443 525 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 CASP7P55210 303 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 CDC37L1Q7L3B6 337 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 ZSCAN16Q9H4T2 348 aaPredicted RBP12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
MTHFD1-210ENST00000555252 H7C1W4 665 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 TAF5LO75529 589 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 TFCP2Q12800 502 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 BMS1Q14692 1282 aaKnown RBP12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 IQCB1Q15051 598 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 STX1AQ16623 288 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 KLHDC4Q8TBB5 520 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 HAUS7Q99871 368 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 IMPACTQ9P2X3 320 aa12.51□□□□□ -0.41
MTHFD1-210ENST00000555252 DBNLQ9UJU6 430 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms