RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MINPP1Q9UNW1 487 aa20.38■□□□□ 0.85
SPTLC2-203ENST00000554901 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
SPTLC2-203ENST00000554901 BCS1LQ9Y276 419 aa20.38■□□□□ 0.85
SPTLC2-203ENST00000554901 TAF1P21675 1872 aa20.38■□□□□ 0.85
SPTLC2-203ENST00000554901 LRRC37AA6NMS7 1700 aa20.38■□□□□ 0.85
SPTLC2-203ENST00000554901 CCDC93Q567U6 631 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 ATG9AQ7Z3C6 839 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 PUS3Q9BZE2 481 aaKnown RBP20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 SIL1Q9H173 461 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 DCTPP1Q9H773 170 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 PODXL2Q9NZ53 605 aa20.37■□□□□ 0.85
SPTLC2-203ENST00000554901 C21orf2O43822 256 aa20.36■□□□□ 0.85
SPTLC2-203ENST00000554901 RAB11FIP3O75154 756 aa20.36■□□□□ 0.85
SPTLC2-203ENST00000554901 RTKN2Q8IZC4 609 aa20.36■□□□□ 0.85
SPTLC2-203ENST00000554901 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
SPTLC2-203ENST00000554901 XDHP47989 1333 aa20.35■□□□□ 0.85
SPTLC2-203ENST00000554901 CHRNDQ07001 517 aa20.35■□□□□ 0.85
SPTLC2-203ENST00000554901 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
SPTLC2-203ENST00000554901 CACNA1SQ13698 1873 aa20.34■□□□□ 0.85
SPTLC2-203ENST00000554901 OS9Q13438 667 aaPredicted RBP20.34■□□□□ 0.85
SPTLC2-203ENST00000554901 METTL24Q5JXM2 366 aa20.34■□□□□ 0.85
SPTLC2-203ENST00000554901 CEP126Q9P2H0 1117 aa20.34■□□□□ 0.85
SPTLC2-203ENST00000554901 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
SPTLC2-203ENST00000554901 MPNDQ8N594 471 aa20.33■□□□□ 0.85
SPTLC2-203ENST00000554901 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
SPTLC2-203ENST00000554901 ANKIB1Q9P2G1 1089 aa20.33■□□□□ 0.85
SPTLC2-203ENST00000554901 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.85
SPTLC2-203ENST00000554901 SPEF2Q9C093 1822 aa20.33■□□□□ 0.84
SPTLC2-203ENST00000554901 PDE8BO95263 885 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 DPP8Q6V1X1 898 aaPredicted RBP20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 KIF1BPQ96EK5 621 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 PSMD1Q99460 953 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 NSFL1CQ9UNZ2 370 aaKnown RBP20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 EXOC6BQ9Y2D4 811 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 GPSM2P81274 684 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
SPTLC2-203ENST00000554901 SASH1O94885 1247 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 UBE4AQ14139 1066 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 SMC5Q8IY18 1101 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 GGA1Q9UJY5 639 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 AKAP2Q9Y2D5 859 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 LTBP3Q9NS15 1303 aa20.31■□□□□ 0.84
SPTLC2-203ENST00000554901 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
SPTLC2-203ENST00000554901 GRIN3BO60391 1043 aa20.3■□□□□ 0.84
SPTLC2-203ENST00000554901 PUM3Q15397 648 aaKnown RBP20.3■□□□□ 0.84
SPTLC2-203ENST00000554901 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
SPTLC2-203ENST00000554901 VPS33BQ9H267 617 aa20.3■□□□□ 0.84
SPTLC2-203ENST00000554901 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
SPTLC2-203ENST00000554901 IGHDP01880 384 aa20.29■□□□□ 0.84
SPTLC2-203ENST00000554901 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPTLC2-203ENST00000554901 FKBP4Q02790 459 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPTLC2-203ENST00000554901 GPR162Q16538 588 aa20.29■□□□□ 0.84
SPTLC2-203ENST00000554901 TBC1D16Q8TBP0 767 aa20.29■□□□□ 0.84
SPTLC2-203ENST00000554901 RHPN1Q8TCX5 695 aa20.29■□□□□ 0.84
SPTLC2-203ENST00000554901 KCNJ4P48050 445 aa20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 TFCP2Q12800 502 aa20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 EYA3Q99504 573 aa20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 LRRCC1Q9C099 1032 aa20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
SPTLC2-203ENST00000554901 TAF5LO75529 589 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 UFL1O94874 794 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 FGFR2P21802 821 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 LPIN2Q92539 896 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 TAOK3Q9H2K8 898 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 A0A1B0GUL6 1792 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 FER1L6Q2WGJ9 1857 aa20.27■□□□□ 0.84
SPTLC2-203ENST00000554901 C6orf229H3BNL8 230 aa20.27■□□□□ 0.83
SPTLC2-203ENST00000554901 SLC51AQ86UW1 340 aa20.27■□□□□ 0.83
SPTLC2-203ENST00000554901 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 NFKBIEO00221 500 aa20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 IFIT1P09914 478 aaKnown RBP20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 ATP2B3Q16720 1220 aa20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 CLASRPQ8N2M8 674 aaKnown RBP20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 MED23Q9ULK4 1368 aa20.26■□□□□ 0.83
SPTLC2-203ENST00000554901 SLC5A1P13866 664 aa20.25■□□□□ 0.83
SPTLC2-203ENST00000554901 TNNI3KQ59H18 835 aa20.25■□□□□ 0.83
SPTLC2-203ENST00000554901 ARHGAP27Q6ZUM4 889 aa20.25■□□□□ 0.83
SPTLC2-203ENST00000554901 CENPQQ7L2Z9 268 aaPredicted RBP20.25■□□□□ 0.83
SPTLC2-203ENST00000554901 ZBTB47Q9UFB7 747 aaPredicted RBP20.25■□□□□ 0.83
SPTLC2-203ENST00000554901 FPGT-TNNI3KV9GXZ4 949 aa20.25■□□□□ 0.83
SPTLC2-203ENST00000554901 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
SPTLC2-203ENST00000554901 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
SPTLC2-203ENST00000554901 ZNF609O15014 1411 aa20.24■□□□□ 0.83
SPTLC2-203ENST00000554901 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
SPTLC2-203ENST00000554901 A0A1B0GUL7 405 aa20.23■□□□□ 0.83
SPTLC2-203ENST00000554901 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
SPTLC2-203ENST00000554901 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms