RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 GOLGA2Q08379 1002 aa23.54■■□□□ 1.36
PRKCH-210ENST00000554835 JARID2Q92833 1246 aaPredicted RBP23.54■■□□□ 1.36
PRKCH-210ENST00000554835 HHIPL1Q96JK4 782 aa23.54■■□□□ 1.36
PRKCH-210ENST00000554835 TSKSQ9UJT2 592 aa23.54■■□□□ 1.36
PRKCH-210ENST00000554835 TBC1D10BQ4KMP7 808 aaPredicted RBP23.53■■□□□ 1.36
PRKCH-210ENST00000554835 PODXL2Q9NZ53 605 aa23.53■■□□□ 1.36
PRKCH-210ENST00000554835 ABHD8Q96I13 439 aa23.52■■□□□ 1.36
PRKCH-210ENST00000554835 PCCAP05165 728 aaPredicted RBP23.51■■□□□ 1.35
PRKCH-210ENST00000554835 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
PRKCH-210ENST00000554835 CCDC191Q8NCU4 936 aa23.51■■□□□ 1.35
PRKCH-210ENST00000554835 ZIC5Q96T25 663 aa23.51■■□□□ 1.35
PRKCH-210ENST00000554835 EYA3Q99504 573 aa23.51■■□□□ 1.35
PRKCH-210ENST00000554835 BEGAINQ9BUH8 593 aa23.51■■□□□ 1.35
PRKCH-210ENST00000554835 RPS12P25398 132 aaKnown RBP23.5■■□□□ 1.35
PRKCH-210ENST00000554835 METTL22Q9BUU2 404 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-210ENST00000554835 VIL1P09327 827 aaKnown RBP23.49■■□□□ 1.35
PRKCH-210ENST00000554835 CALD1Q05682 793 aaKnown RBP23.49■■□□□ 1.35
PRKCH-210ENST00000554835 RBM26Q5T8P6 1007 aaKnown RBP23.49■■□□□ 1.35
PRKCH-210ENST00000554835 CCDC85AQ96PX6 553 aaPredicted RBP23.49■■□□□ 1.35
PRKCH-210ENST00000554835 CWC25Q9NXE8 425 aaPredicted RBP23.49■■□□□ 1.35
PRKCH-210ENST00000554835 PDE8AO60658 829 aa23.48■■□□□ 1.35
PRKCH-210ENST00000554835 UFL1O94874 794 aa23.48■■□□□ 1.35
PRKCH-210ENST00000554835 CCDC152Q4G0S7 254 aa23.48■■□□□ 1.35
PRKCH-210ENST00000554835 KRT26Q7Z3Y9 468 aa23.48■■□□□ 1.35
PRKCH-210ENST00000554835 ZC3H12CQ9C0D7 883 aaKnown RBP23.48■■□□□ 1.35
PRKCH-210ENST00000554835 ADM5C9JUS6 153 aa23.47■■□□□ 1.35
PRKCH-210ENST00000554835 BRPF1P55201 1214 aaPredicted RBP23.47■■□□□ 1.35
PRKCH-210ENST00000554835 CCDC184Q52MB2 194 aa23.47■■□□□ 1.35
PRKCH-210ENST00000554835 ANKIB1Q9P2G1 1089 aa23.47■■□□□ 1.35
PRKCH-210ENST00000554835 WTIPA6NIX2 430 aaPredicted RBP23.46■■□□□ 1.35
PRKCH-210ENST00000554835 ASTN2O75129 1339 aaPredicted RBP23.46■■□□□ 1.35
PRKCH-210ENST00000554835 HUNKP57058 714 aa23.46■■□□□ 1.35
PRKCH-210ENST00000554835 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
PRKCH-210ENST00000554835 GGA1Q9UJY5 639 aa23.46■■□□□ 1.35
PRKCH-210ENST00000554835 MAP3K2Q9Y2U5 619 aa23.46■■□□□ 1.35
PRKCH-210ENST00000554835 CASP8AP2Q9UKL3 1982 aa23.45■■□□□ 1.35
PRKCH-210ENST00000554835 IGKV5-2P06315 115 aa23.45■■□□□ 1.34
PRKCH-210ENST00000554835 HSP90B1P14625 803 aaKnown RBP23.45■■□□□ 1.34
PRKCH-210ENST00000554835 KIF4BQ2VIQ3 1234 aa23.45■■□□□ 1.34
PRKCH-210ENST00000554835 PSME4Q14997 1843 aa23.45■■□□□ 1.34
PRKCH-210ENST00000554835 FAM155AB1AL88 458 aaPredicted RBP23.44■■□□□ 1.34
PRKCH-210ENST00000554835 TSR2Q969E8 191 aaKnown RBP23.44■■□□□ 1.34
PRKCH-210ENST00000554835 PI4KAP2A4QPH2 592 aa23.43■■□□□ 1.34
PRKCH-210ENST00000554835 DDX58O95786 925 aaKnown RBP23.43■■□□□ 1.34
PRKCH-210ENST00000554835 KSR2Q6VAB6 950 aa23.43■■□□□ 1.34
PRKCH-210ENST00000554835 PI4KAP1Q8N8J0 262 aa23.43■■□□□ 1.34
PRKCH-210ENST00000554835 DCPSQ96C86 337 aaKnown RBP23.43■■□□□ 1.34
PRKCH-210ENST00000554835 ZNF609O15014 1411 aa23.42■■□□□ 1.34
PRKCH-210ENST00000554835 CA12O43570 354 aa23.42■■□□□ 1.34
PRKCH-210ENST00000554835 ZNF280AP59817 542 aaPredicted RBP23.42■■□□□ 1.34
PRKCH-210ENST00000554835 NOGQ13253 232 aa23.42■■□□□ 1.34
PRKCH-210ENST00000554835 ANKRD18AQ8IVF6 992 aa23.42■■□□□ 1.34
PRKCH-210ENST00000554835 GMLQ99445 158 aa23.42■■□□□ 1.34
PRKCH-210ENST00000554835 GBA2Q9HCG7 927 aaPredicted RBP23.42■■□□□ 1.34
PRKCH-210ENST00000554835 GGA3Q9NZ52 723 aa23.42■■□□□ 1.34
PRKCH-210ENST00000554835 XDHP47989 1333 aa23.41■■□□□ 1.34
PRKCH-210ENST00000554835 CTSWP56202 376 aa23.41■■□□□ 1.34
PRKCH-210ENST00000554835 RSBN1LQ6PCB5 846 aaPredicted RBP23.41■■□□□ 1.34
PRKCH-210ENST00000554835 TTLL11Q8NHH1 800 aa23.41■■□□□ 1.34
PRKCH-210ENST00000554835 MYH3P11055 1940 aa23.4■■□□□ 1.34
PRKCH-210ENST00000554835 CWF19L2Q2TBE0 894 aaKnown RBP23.4■■□□□ 1.34
PRKCH-210ENST00000554835 RGMBQ6NW40 437 aa23.4■■□□□ 1.34
PRKCH-210ENST00000554835 G2E3Q7L622 706 aa23.4■■□□□ 1.34
PRKCH-210ENST00000554835 AGBL3Q8NEM8 1001 aa23.4■■□□□ 1.34
PRKCH-210ENST00000554835 SPEF2Q9C093 1822 aa23.39■■□□□ 1.33
PRKCH-210ENST00000554835 G3V3G9 751 aa23.39■■□□□ 1.33
PRKCH-210ENST00000554835 DCAF8Q5TAQ9 597 aa23.39■■□□□ 1.33
PRKCH-210ENST00000554835 GREM2Q9H772 168 aa23.39■■□□□ 1.33
PRKCH-210ENST00000554835 ATP2B4P23634 1241 aa23.38■■□□□ 1.33
PRKCH-210ENST00000554835 SCARF1Q14162 830 aa23.38■■□□□ 1.33
PRKCH-210ENST00000554835 WWC1Q8IX03 1113 aa23.38■■□□□ 1.33
PRKCH-210ENST00000554835 C2orf69Q8N8R5 385 aa23.38■■□□□ 1.33
PRKCH-210ENST00000554835 MINPP1Q9UNW1 487 aa23.38■■□□□ 1.33
PRKCH-210ENST00000554835 ZNF646O15015 1829 aaPredicted RBP23.38■■□□□ 1.33
PRKCH-210ENST00000554835 NEURL1BA8MQ27 555 aa23.37■■□□□ 1.33
PRKCH-210ENST00000554835 SULF1Q8IWU6 871 aa23.37■■□□□ 1.33
PRKCH-210ENST00000554835 CDCA5Q96FF9 252 aa23.37■■□□□ 1.33
PRKCH-210ENST00000554835 CHMP4AQ9BY43 222 aa23.37■■□□□ 1.33
PRKCH-210ENST00000554835 CCDC85CA6NKD9 419 aa23.36■■□□□ 1.33
PRKCH-210ENST00000554835 CCDC27Q2M243 656 aa23.36■■□□□ 1.33
PRKCH-210ENST00000554835 ANGEL2Q5VTE6 544 aaKnown RBP23.36■■□□□ 1.33
PRKCH-210ENST00000554835 CDC5LQ99459 802 aaKnown RBP23.36■■□□□ 1.33
PRKCH-210ENST00000554835 MCOLN1Q9GZU1 580 aa23.36■■□□□ 1.33
PRKCH-210ENST00000554835 BSDC1Q9NW68 430 aaPredicted RBP23.36■■□□□ 1.33
PRKCH-210ENST00000554835 USP17L3A6NCW0 530 aa23.35■■□□□ 1.33
PRKCH-210ENST00000554835 USP17L4A6NCW7 530 aa23.35■■□□□ 1.33
PRKCH-210ENST00000554835 ZNF157P51786 506 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-210ENST00000554835 KIF23Q02241 960 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-210ENST00000554835 USP17L1Q7RTZ2 530 aa23.35■■□□□ 1.33
PRKCH-210ENST00000554835 PODNQ7Z5L7 613 aa23.35■■□□□ 1.33
PRKCH-210ENST00000554835 H7C1W4 665 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 USP17L8P0C7I0 530 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 TWISTNBQ3B726 338 aaPredicted RBP23.34■■□□□ 1.33
PRKCH-210ENST00000554835 FAM161AQ3B820 660 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 CCDC102AQ96A19 550 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 MXD3Q9BW11 206 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 STK31Q9BXU1 1019 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 MYOZ2Q9NPC6 264 aa23.34■■□□□ 1.33
PRKCH-210ENST00000554835 SCAF8Q9UPN6 1271 aaKnown RBP23.34■■□□□ 1.33
PRKCH-210ENST00000554835 MED23Q9ULK4 1368 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms