RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CEMIPQ8WUJ3 1361 aa13.82□□□□□ -0.2
SRP54-205ENST00000554803 SZT2Q5T011 3432 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 PPEF1O14829 653 aaPredicted RBP13.81□□□□□ -0.2
SRP54-205ENST00000554803 KCNQ3O43525 872 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 SLC10A3P09131 477 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 ZNF157P51786 506 aaPredicted RBP13.81□□□□□ -0.2
SRP54-205ENST00000554803 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
SRP54-205ENST00000554803 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
SRP54-205ENST00000554803 CRAMP1Q96RY5 1269 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 BCL2L13Q9BXK5 485 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 NYXQ9GZU5 481 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 LAMB2P55268 1798 aa13.81□□□□□ -0.2
SRP54-205ENST00000554803 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
SRP54-205ENST00000554803 FXR1P51114 621 aaKnown RBP eCLIP13.8□□□□□ -0.2
SRP54-205ENST00000554803 HLFQ16534 295 aa13.8□□□□□ -0.2
SRP54-205ENST00000554803 DLK2Q6UY11 383 aa13.8□□□□□ -0.2
SRP54-205ENST00000554803 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
SRP54-205ENST00000554803 C2orf69Q8N8R5 385 aa13.8□□□□□ -0.2
SRP54-205ENST00000554803 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
SRP54-205ENST00000554803 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
SRP54-205ENST00000554803 ANKRD36CQ5JPF3 1778 aa13.79□□□□□ -0.2
SRP54-205ENST00000554803 PRAMEF22A3QJZ6 481 aa13.79□□□□□ -0.2
SRP54-205ENST00000554803 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
SRP54-205ENST00000554803 PTMSP20962 102 aa13.79□□□□□ -0.2
SRP54-205ENST00000554803 TNIP1Q15025 636 aa13.79□□□□□ -0.2
SRP54-205ENST00000554803 REM2Q8IYK8 340 aaPredicted RBP13.79□□□□□ -0.2
SRP54-205ENST00000554803 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
SRP54-205ENST00000554803 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
SRP54-205ENST00000554803 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
SRP54-205ENST00000554803 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
SRP54-205ENST00000554803 IBTKQ9P2D0 1353 aaPredicted RBP13.79□□□□□ -0.2
SRP54-205ENST00000554803 PAPPA2Q9BXP8 1791 aa13.78□□□□□ -0.2
SRP54-205ENST00000554803 BTBD11A6QL63 1104 aa13.78□□□□□ -0.2
SRP54-205ENST00000554803 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
SRP54-205ENST00000554803 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
SRP54-205ENST00000554803 SUPT20HQ8NEM7 779 aa13.78□□□□□ -0.2
SRP54-205ENST00000554803 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
SRP54-205ENST00000554803 HDAC9Q9UKV0 1011 aa13.78□□□□□ -0.2
SRP54-205ENST00000554803 SHTN1A0MZ66 631 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 H7C1D1 291 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 RAD17O75943 681 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.21
SRP54-205ENST00000554803 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 MIS18AQ9NYP9 233 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 HTTP42858 3142 aa13.77□□□□□ -0.21
SRP54-205ENST00000554803 TAF1P21675 1872 aa13.76□□□□□ -0.21
SRP54-205ENST00000554803 SNRPA1P09661 255 aaKnown RBP13.76□□□□□ -0.21
SRP54-205ENST00000554803 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
SRP54-205ENST00000554803 FBXO46Q6PJ61 603 aaPredicted RBP13.76□□□□□ -0.21
SRP54-205ENST00000554803 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
SRP54-205ENST00000554803 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SRP54-205ENST00000554803 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
SRP54-205ENST00000554803 TMX4Q9H1E5 349 aaPredicted RBP13.76□□□□□ -0.21
SRP54-205ENST00000554803 MBIPQ9NS73 344 aa13.76□□□□□ -0.21
SRP54-205ENST00000554803 ATP6V0A2Q9Y487 856 aa13.76□□□□□ -0.21
SRP54-205ENST00000554803 CENPFP49454 3210 aa13.75□□□□□ -0.21
SRP54-205ENST00000554803 GNAI1P63096 354 aa13.75□□□□□ -0.21
SRP54-205ENST00000554803 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
SRP54-205ENST00000554803 LRRC37AA6NMS7 1700 aa13.75□□□□□ -0.21
SRP54-205ENST00000554803 ADM5C9JUS6 153 aa13.74□□□□□ -0.21
SRP54-205ENST00000554803 CHL1O00533 1208 aa13.74□□□□□ -0.21
SRP54-205ENST00000554803 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
SRP54-205ENST00000554803 RASAL3Q86YV0 1011 aa13.74□□□□□ -0.21
SRP54-205ENST00000554803 DPF2Q92785 391 aa13.74□□□□□ -0.21
SRP54-205ENST00000554803 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
SRP54-205ENST00000554803 DUOX1Q9NRD9 1551 aa13.74□□□□□ -0.21
SRP54-205ENST00000554803 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 YDJCA8MPS7 323 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
SRP54-205ENST00000554803 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
SRP54-205ENST00000554803 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
SRP54-205ENST00000554803 ANTXR1Q9H6X2 564 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
SRP54-205ENST00000554803 BRCA2P51587 3418 aa13.73□□□□□ -0.21
SRP54-205ENST00000554803 ABCC4O15439 1325 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 EGFRP00533 1210 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 RLBP1P12271 317 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
SRP54-205ENST00000554803 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
SRP54-205ENST00000554803 FAM43AQ8N2R8 423 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 CHMP5Q9NZZ3 219 aa13.72□□□□□ -0.21
SRP54-205ENST00000554803 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
SRP54-205ENST00000554803 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.21
SRP54-205ENST00000554803 SCN9AQ15858 1988 aa13.71□□□□□ -0.21
SRP54-205ENST00000554803 FRAT2O75474 233 aaPredicted RBP13.71□□□□□ -0.21
SRP54-205ENST00000554803 NTSR2O95665 410 aa13.71□□□□□ -0.21
SRP54-205ENST00000554803 SUSD4Q5VX71 490 aa13.71□□□□□ -0.21
SRP54-205ENST00000554803 MPNDQ8N594 471 aa13.71□□□□□ -0.21
SRP54-205ENST00000554803 TSPYL6Q8N831 410 aa13.71□□□□□ -0.21
SRP54-205ENST00000554803 PSME4Q14997 1843 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms