RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HSF2BPO75031 334 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 LDHCP07864 332 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 AK2P54819 239 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
VTI1B-204ENST00000554659 EXOC1Q9NV70 894 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 TNNQ9UQP3 1299 aa15.95■□□□□ 0.14
VTI1B-204ENST00000554659 GPTP24298 496 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 CEP112Q8N8E3 955 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 IVLP07476 585 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 TUBB4BP68371 445 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 STXBP4Q6ZWJ1 553 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 DENND4BO75064 1496 aaPredicted RBP15.94■□□□□ 0.14
VTI1B-204ENST00000554659 ANXA1P04083 346 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
VTI1B-204ENST00000554659 TESK2Q96S53 571 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 USP26Q9BXU7 913 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 LRRC2Q9BYS8 371 aa15.94■□□□□ 0.14
VTI1B-204ENST00000554659 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 NOP2P46087 812 aaKnown RBP15.93■□□□□ 0.14
VTI1B-204ENST00000554659 RAD50Q92878 1312 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 TCOF1Q13428 1488 aaKnown RBP15.93■□□□□ 0.14
VTI1B-204ENST00000554659 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 SPTLC2O15270 562 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 LIG1P18858 919 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 TCERG1LQ5VWI1 586 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 DNAI2Q9GZS0 605 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 PPP4R3AQ6IN85 833 aa15.93■□□□□ 0.14
VTI1B-204ENST00000554659 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
VTI1B-204ENST00000554659 ATP2C2O75185 946 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 SEC24BO95487 1268 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 BAG3O95817 575 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 IL15P40933 162 aaPredicted RBP15.92■□□□□ 0.14
VTI1B-204ENST00000554659 RTN1Q16799 776 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 CCDC94Q9BW85 323 aaPredicted RBP15.92■□□□□ 0.14
VTI1B-204ENST00000554659 SPTY2D1Q68D10 685 aaPredicted RBP15.92■□□□□ 0.14
VTI1B-204ENST00000554659 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 ZFYVE9O95405 1425 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 PRPF4BQ13523 1007 aaKnown RBP15.92■□□□□ 0.14
VTI1B-204ENST00000554659 GOLGA1Q92805 767 aa15.92■□□□□ 0.14
VTI1B-204ENST00000554659 CHMLP26374 656 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 ESR2Q92731 530 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 PPIP5K1Q6PFW1 1433 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 AFMP43652 599 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 GTPBP4Q9BZE4 634 aaKnown RBP15.91■□□□□ 0.14
VTI1B-204ENST00000554659 FBLN1P23142 703 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 STAT6P42226 847 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 CRNKL1Q9BZJ0 848 aaKnown RBP15.91■□□□□ 0.14
VTI1B-204ENST00000554659 POLKQ9UBT6 870 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
VTI1B-204ENST00000554659 CCDC172P0C7W6 258 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 RUFY3Q7L099 469 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
VTI1B-204ENST00000554659 CTAGE9A4FU28 777 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 PTGS1P23219 599 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 EIF4A2Q14240 407 aaKnown RBP15.9■□□□□ 0.14
VTI1B-204ENST00000554659 ATL3Q6DD88 541 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 FSD2A1L4K1 749 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 MYO1BO43795 1136 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 CTNNA2P26232 953 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 FBF1Q8TES7 1133 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
VTI1B-204ENST00000554659 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
VTI1B-204ENST00000554659 PSMA7O14818 248 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
VTI1B-204ENST00000554659 PRC1O43663 620 aa15.9■□□□□ 0.14
VTI1B-204ENST00000554659 MARCKSP29966 332 aaPredicted RBP15.9■□□□□ 0.14
VTI1B-204ENST00000554659 AKAP4Q5JQC9 854 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 KRT28Q7Z3Y7 464 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 BRAPQ7Z569 592 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
VTI1B-204ENST00000554659 GTF2A1P52655 376 aaPredicted RBP15.89■□□□□ 0.13
VTI1B-204ENST00000554659 PAG1Q9NWQ8 432 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
VTI1B-204ENST00000554659 KRT83P78385 493 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 TSPYL6Q8N831 410 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 OPA1O60313 960 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 TACC1O75410 805 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 IFIT1BQ5T764 474 aaKnown RBP15.89■□□□□ 0.13
VTI1B-204ENST00000554659 COPS6Q7L5N1 327 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 RSPH14Q9UHP6 348 aa15.89■□□□□ 0.13
VTI1B-204ENST00000554659 HSPA4P34932 840 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 MCM6Q14566 821 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 C6orf163Q5TEZ5 329 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 JARID2Q92833 1246 aaPredicted RBP15.88■□□□□ 0.13
VTI1B-204ENST00000554659 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 KDM2BQ8NHM5 1336 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 GNAQP50148 359 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 RPGRQ92834 1020 aaKnown RBP15.88■□□□□ 0.13
VTI1B-204ENST00000554659 SERPINA10Q9UK55 444 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 KIAA0753Q2KHM9 967 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 SPATA24Q86W54 205 aa15.88■□□□□ 0.13
VTI1B-204ENST00000554659 TRIM75PA6NK02 468 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 DRC1Q96MC2 740 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms