RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 BCL2L13Q9BXK5 485 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 ADARB2Q9NS39 739 aaKnown RBP11.09□□□□□ -0.63
ACTN1-213ENST00000554508 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-213ENST00000554508 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 GGA1Q9UJY5 639 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 PSME4Q14997 1843 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 YDJCA8MPS7 323 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 F6X3S4 739 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 RAD17O75943 681 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 UFL1O94874 794 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 ATP2B4P23634 1241 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 GMPSP49915 693 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-213ENST00000554508 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 GREM2Q9H772 168 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
ACTN1-213ENST00000554508 TRPM7Q96QT4 1865 aa11.08□□□□□ -0.64
ACTN1-213ENST00000554508 G3V3G9 751 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 H7C1D1 291 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 ECE2O60344 883 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 ALDH1L1O75891 902 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
ACTN1-213ENST00000554508 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 JMYQ8N9B5 988 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 DPF2Q92785 391 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 DBNDD1Q9H9R9 158 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 CNOT7Q9UIV1 285 aaKnown RBP11.07□□□□□ -0.64
ACTN1-213ENST00000554508 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 SCN9AQ15858 1988 aa11.07□□□□□ -0.64
ACTN1-213ENST00000554508 TMEM88BA6NKF7 163 aa11.06□□□□□ -0.64
ACTN1-213ENST00000554508 PSMD14O00487 310 aa11.06□□□□□ -0.64
ACTN1-213ENST00000554508 ITGA6P23229 1130 aa11.06□□□□□ -0.64
ACTN1-213ENST00000554508 RPS12P25398 132 aaKnown RBP11.06□□□□□ -0.64
ACTN1-213ENST00000554508 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
ACTN1-213ENST00000554508 MAP1SQ66K74 1059 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-213ENST00000554508 TRMT2AQ8IZ69 625 aaKnown RBP11.06□□□□□ -0.64
ACTN1-213ENST00000554508 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
ACTN1-213ENST00000554508 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
ACTN1-213ENST00000554508 ANKRD2Q9GZV1 360 aa11.06□□□□□ -0.64
ACTN1-213ENST00000554508 C9orf78Q9NZ63 289 aaPredicted RBP11.06□□□□□ -0.64
ACTN1-213ENST00000554508 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 GRM8O00222 908 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 VIL1P09327 827 aaKnown RBP11.05□□□□□ -0.64
ACTN1-213ENST00000554508 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-213ENST00000554508 CCT4P50991 539 aaKnown RBP11.05□□□□□ -0.64
ACTN1-213ENST00000554508 ALDH1L2Q3SY69 923 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 SLC4A10Q6U841 1118 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 GPR101Q96P66 508 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-213ENST00000554508 MPHOSPH8Q99549 860 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 PGAP2Q9UHJ9 254 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 PTPRCP08575 1304 aa11.05□□□□□ -0.64
ACTN1-213ENST00000554508 FOXO4P98177 505 aa11.04□□□□□ -0.64
ACTN1-213ENST00000554508 IFIT5Q13325 482 aaKnown RBP11.04□□□□□ -0.64
ACTN1-213ENST00000554508 FAM161AQ3B820 660 aa11.04□□□□□ -0.64
ACTN1-213ENST00000554508 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
ACTN1-213ENST00000554508 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
ACTN1-213ENST00000554508 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
ACTN1-213ENST00000554508 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
ACTN1-213ENST00000554508 LMBR1LQ6UX01 489 aa11.03□□□□□ -0.64
ACTN1-213ENST00000554508 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
ACTN1-213ENST00000554508 AGBL3Q8NEM8 1001 aa11.03□□□□□ -0.64
ACTN1-213ENST00000554508 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-213ENST00000554508 CHMP3Q9Y3E7 222 aa11.03□□□□□ -0.64
ACTN1-213ENST00000554508 ZNF609O15014 1411 aa11.02□□□□□ -0.64
ACTN1-213ENST00000554508 HIRAP54198 1017 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-213ENST00000554508 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
ACTN1-213ENST00000554508 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.65
ACTN1-213ENST00000554508 ZNF804BA4D1E1 1349 aa11.02□□□□□ -0.65
ACTN1-213ENST00000554508 UTYO14607 1347 aa11.02□□□□□ -0.65
ACTN1-213ENST00000554508 CNTNAP1P78357 1384 aa11.02□□□□□ -0.65
ACTN1-213ENST00000554508 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 CHRNDQ07001 517 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 DEFB115Q30KQ5 88 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 EPHA10Q5JZY3 1008 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 COA1Q9GZY4 146 aa11.01□□□□□ -0.65
ACTN1-213ENST00000554508 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
ACTN1-213ENST00000554508 SHTN1A0MZ66 631 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 WTIPA6NIX2 430 aaPredicted RBP11□□□□□ -0.65
ACTN1-213ENST00000554508 RASSF10A6NK89 507 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 KCNJ4P48050 445 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 MMP14P50281 582 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 BRPF1P55201 1214 aaPredicted RBP11□□□□□ -0.65
ACTN1-213ENST00000554508 TBC1D10BQ4KMP7 808 aaPredicted RBP11□□□□□ -0.65
ACTN1-213ENST00000554508 TAF7LQ5H9L4 462 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 LDHAL6AQ6ZMR3 332 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 PCNTO95613 3336 aa11□□□□□ -0.65
ACTN1-213ENST00000554508 TRAF5O00463 557 aa10.99□□□□□ -0.65
ACTN1-213ENST00000554508 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-213ENST00000554508 ZNF280AP59817 542 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms