RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 DPP8Q6V1X1 898 aaPredicted RBP9.6□□□□□ -0.87
LINC00640-201ENST00000554409 TRMT2AQ8IZ69 625 aaKnown RBP9.6□□□□□ -0.87
LINC00640-201ENST00000554409 MPNDQ8N594 471 aa9.6□□□□□ -0.87
LINC00640-201ENST00000554409 CELF1Q92879 486 aaKnown RBP9.6□□□□□ -0.87
LINC00640-201ENST00000554409 PHF12Q96QT6 1004 aa9.6□□□□□ -0.87
LINC00640-201ENST00000554409 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 PPIP5K2O43314 1243 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 CASP7P55210 303 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 CTSWP56202 376 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 RPS8P62241 208 aaKnown RBP9.59□□□□□ -0.87
LINC00640-201ENST00000554409 KIAA2012Q0VF49 1180 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 DIEXFQ68CQ4 756 aaKnown RBP9.59□□□□□ -0.87
LINC00640-201ENST00000554409 GPC2Q8N158 579 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 LARGE2Q8N3Y3 721 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 PLA2G12BQ9BX93 195 aa9.59□□□□□ -0.87
LINC00640-201ENST00000554409 EIF6P56537 245 aaKnown RBP9.58□□□□□ -0.88
LINC00640-201ENST00000554409 AOC3Q16853 763 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 UBE3BQ7Z3V4 1068 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 NIM1KQ8IY84 436 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 TTLL11Q8NHH1 800 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 JARID2Q92833 1246 aaPredicted RBP9.58□□□□□ -0.88
LINC00640-201ENST00000554409 SEC31BQ9NQW1 1179 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 PODXL2Q9NZ53 605 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
LINC00640-201ENST00000554409 A0A1B0GUL6 1792 aa9.58□□□□□ -0.88
LINC00640-201ENST00000554409 PSME4Q14997 1843 aa9.57□□□□□ -0.88
LINC00640-201ENST00000554409 F6X3S4 739 aa9.57□□□□□ -0.88
LINC00640-201ENST00000554409 CT47B1P0C2W7 299 aaPredicted RBP9.57□□□□□ -0.88
LINC00640-201ENST00000554409 ALDH1L2Q3SY69 923 aa9.57□□□□□ -0.88
LINC00640-201ENST00000554409 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
LINC00640-201ENST00000554409 CDCA7LQ96GN5 454 aa9.57□□□□□ -0.88
LINC00640-201ENST00000554409 CDC5LQ99459 802 aaKnown RBP9.57□□□□□ -0.88
LINC00640-201ENST00000554409 PTPRCP08575 1304 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 ALDH1L1O75891 902 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 CSF1RP07333 972 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 APLP1P51693 650 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 GPSM2P81274 684 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 ANKRD18AQ8IVF6 992 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 TAF1DQ9H5J8 278 aaPredicted RBP9.56□□□□□ -0.88
LINC00640-201ENST00000554409 GREM2Q9H772 168 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 POLLQ9UGP5 575 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 ZNRF3Q9ULT6 936 aa9.56□□□□□ -0.88
LINC00640-201ENST00000554409 NSFL1CQ9UNZ2 370 aaKnown RBP9.56□□□□□ -0.88
LINC00640-201ENST00000554409 WASHC4Q2M389 1173 aa9.55□□□□□ -0.88
LINC00640-201ENST00000554409 PNMA8AQ86V59 439 aaPredicted RBP9.55□□□□□ -0.88
LINC00640-201ENST00000554409 TBC1D16Q8TBP0 767 aa9.55□□□□□ -0.88
LINC00640-201ENST00000554409 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
LINC00640-201ENST00000554409 CCDC85AQ96PX6 553 aaPredicted RBP9.55□□□□□ -0.88
LINC00640-201ENST00000554409 EYA3Q99504 573 aa9.55□□□□□ -0.88
LINC00640-201ENST00000554409 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
LINC00640-201ENST00000554409 BSDC1Q9NW68 430 aaPredicted RBP9.55□□□□□ -0.88
LINC00640-201ENST00000554409 XDHP47989 1333 aa9.55□□□□□ -0.88
LINC00640-201ENST00000554409 ZNF646O15015 1829 aaPredicted RBP9.54□□□□□ -0.88
LINC00640-201ENST00000554409 YDJCA8MPS7 323 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 GRM8O00222 908 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 ITGA6P23229 1130 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 EPHX2P34913 555 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 SCNN1DP51172 638 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 FOXO4P98177 505 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 CXCL9Q07325 125 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 LDHDQ86WU2 507 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 GGA1Q9UJY5 639 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 UTYO14607 1347 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 SCN9AQ15858 1988 aa9.54□□□□□ -0.88
LINC00640-201ENST00000554409 C6orf229H3BNL8 230 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 UFL1O94874 794 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 ATP2B4P23634 1241 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
LINC00640-201ENST00000554409 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
LINC00640-201ENST00000554409 TNIP1Q15025 636 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 FAM161AQ3B820 660 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 CIAPIN1Q6FI81 312 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 SLC4A10Q6U841 1118 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 GPRC5DQ9NZD1 345 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 ZNF609O15014 1411 aa9.53□□□□□ -0.88
LINC00640-201ENST00000554409 MED23Q9ULK4 1368 aa9.52□□□□□ -0.88
LINC00640-201ENST00000554409 ECE2O60344 883 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 IGHMBP2P38935 993 aaKnown RBP9.52□□□□□ -0.89
LINC00640-201ENST00000554409 EPS15P42566 896 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 USP50Q70EL3 339 aaPredicted RBP9.52□□□□□ -0.89
LINC00640-201ENST00000554409 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 DBNDD1Q9H9R9 158 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 SMC4Q9NTJ3 1288 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 C9orf78Q9NZ63 289 aaPredicted RBP9.52□□□□□ -0.89
LINC00640-201ENST00000554409 MINPP1Q9UNW1 487 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
LINC00640-201ENST00000554409 ANKRD18BA2A2Z9 1011 aa9.51□□□□□ -0.89
LINC00640-201ENST00000554409 RIMBP2O15034 1052 aa9.51□□□□□ -0.89
LINC00640-201ENST00000554409 RAD17O75943 681 aa9.51□□□□□ -0.89
LINC00640-201ENST00000554409 PYGBP11216 843 aa9.51□□□□□ -0.89
LINC00640-201ENST00000554409 GMPSP49915 693 aaPredicted RBP9.51□□□□□ -0.89
LINC00640-201ENST00000554409 EAPPQ56P03 285 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms