RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CELF1Q92879 486 aaKnown RBP10.08□□□□□ -0.8
ABCD4-220ENST00000553998 CDCA5Q96FF9 252 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 EYA3Q99504 573 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 CFHR5Q9BXR6 569 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 PODXL2Q9NZ53 605 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 TSPYL4Q9UJ04 414 aa10.08□□□□□ -0.8
ABCD4-220ENST00000553998 ANXA1P04083 346 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 TM4SF4P48230 202 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 TRIM28Q13263 835 aaKnown RBP10.07□□□□□ -0.8
ABCD4-220ENST00000553998 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
ABCD4-220ENST00000553998 AGBL3Q8NEM8 1001 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 TBC1D16Q8TBP0 767 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 GMLQ99445 158 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 ISCA1Q9BUE6 129 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 GGA3Q9NZ52 723 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
ABCD4-220ENST00000553998 C6orf229H3BNL8 230 aa10.06□□□□□ -0.8
ABCD4-220ENST00000553998 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
ABCD4-220ENST00000553998 RPS8P62241 208 aaKnown RBP10.06□□□□□ -0.8
ABCD4-220ENST00000553998 SCARF1Q14162 830 aa10.06□□□□□ -0.8
ABCD4-220ENST00000553998 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
ABCD4-220ENST00000553998 ZNF296Q8WUU4 475 aaPredicted RBP10.06□□□□□ -0.8
ABCD4-220ENST00000553998 GCC1Q96CN9 775 aa10.06□□□□□ -0.8
ABCD4-220ENST00000553998 ASTN2O75129 1339 aaPredicted RBP10.06□□□□□ -0.8
ABCD4-220ENST00000553998 AIMP1Q12904 312 aaKnown RBP10.05□□□□□ -0.8
ABCD4-220ENST00000553998 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
ABCD4-220ENST00000553998 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
ABCD4-220ENST00000553998 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
ABCD4-220ENST00000553998 PLBD2Q8NHP8 589 aa10.05□□□□□ -0.8
ABCD4-220ENST00000553998 ZC3H12CQ9C0D7 883 aaKnown RBP10.05□□□□□ -0.8
ABCD4-220ENST00000553998 ANKRD36CQ5JPF3 1778 aa10.05□□□□□ -0.8
ABCD4-220ENST00000553998 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
ABCD4-220ENST00000553998 LRRC37AA6NMS7 1700 aa10.04□□□□□ -0.8
ABCD4-220ENST00000553998 GPR25O00155 361 aa10.04□□□□□ -0.8
ABCD4-220ENST00000553998 ANGEL2Q5VTE6 544 aaKnown RBP10.04□□□□□ -0.8
ABCD4-220ENST00000553998 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
ABCD4-220ENST00000553998 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
ABCD4-220ENST00000553998 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
ABCD4-220ENST00000553998 CHL1O00533 1208 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 TBC1D8O95759 1140 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 HOXB7P09629 217 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 RIPK4P57078 832 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 MIER1Q8N108 512 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 MYOZ2Q9NPC6 264 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 HDAC9Q9UKV0 1011 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 MAPK8IP3Q9UPT6 1336 aa10.03□□□□□ -0.8
ABCD4-220ENST00000553998 HTTP42858 3142 aa10.02□□□□□ -0.81
ABCD4-220ENST00000553998 IRS4O14654 1257 aaPredicted RBP10.02□□□□□ -0.81
ABCD4-220ENST00000553998 USP17L8P0C7I0 530 aa10.02□□□□□ -0.81
ABCD4-220ENST00000553998 MMP14P50281 582 aa10.02□□□□□ -0.81
ABCD4-220ENST00000553998 HABP4Q5JVS0 413 aaKnown RBP10.02□□□□□ -0.81
ABCD4-220ENST00000553998 RUNDC1Q96C34 613 aa10.02□□□□□ -0.81
ABCD4-220ENST00000553998 UBE2Q2LH0YL09 131 aa10.01□□□□□ -0.81
ABCD4-220ENST00000553998 MOB2Q70IA6 237 aa10.01□□□□□ -0.81
ABCD4-220ENST00000553998 CHPF2Q9P2E5 772 aa10.01□□□□□ -0.81
ABCD4-220ENST00000553998 DBF4Q9UBU7 674 aaPredicted RBP10.01□□□□□ -0.81
ABCD4-220ENST00000553998 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
ABCD4-220ENST00000553998 BRCA2P51587 3418 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 COL4A1P02462 1669 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 USP17L3A6NCW0 530 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 USP17L4A6NCW7 530 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 ATP5J2-PTCD1G3V325 749 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 FKTNO75072 461 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 UFL1O94874 794 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 HSP90B1P14625 803 aaKnown RBP10□□□□□ -0.81
ABCD4-220ENST00000553998 TMPOP42166 694 aaKnown RBP10□□□□□ -0.81
ABCD4-220ENST00000553998 LMOD3Q0VAK6 560 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 SREBF2Q12772 1141 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 LDLRAD1Q5T700 205 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 INTS3Q68E01 1043 aaKnown RBP10□□□□□ -0.81
ABCD4-220ENST00000553998 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 ZBTB38Q8NAP3 1195 aaPredicted RBP10□□□□□ -0.81
ABCD4-220ENST00000553998 SEC31BQ9NQW1 1179 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 LAMB2P55268 1798 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 PAPPA2Q9BXP8 1791 aa10□□□□□ -0.81
ABCD4-220ENST00000553998 G3V3G9 751 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 ALDH1A1P00352 501 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 ATP2B4P23634 1241 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 INHBEP58166 350 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 KRT24Q2M2I5 525 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 NBPF9Q3BBW0 867 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 NCBP3Q53F19 620 aaKnown RBP9.99□□□□□ -0.81
ABCD4-220ENST00000553998 DCAF8Q5TAQ9 597 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 R3HDMLQ9H3Y0 253 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 HYPKQ9NX55 129 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 ANKIB1Q9P2G1 1089 aa9.99□□□□□ -0.81
ABCD4-220ENST00000553998 WNT10BO00744 389 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
ABCD4-220ENST00000553998 DACT2Q5SW24 774 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 HDGFL1Q5TGJ6 251 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 CCDC146Q8IYE0 955 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 FAM9BQ8IZU0 186 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 ZNF428Q96B54 188 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 ZBED3Q96IU2 234 aaPredicted RBP9.98□□□□□ -0.81
ABCD4-220ENST00000553998 XDHP47989 1333 aa9.98□□□□□ -0.81
ABCD4-220ENST00000553998 CENPFP49454 3210 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 UNCXA6NJT0 531 aa9.97□□□□□ -0.81
ABCD4-220ENST00000553998 PDE8AO60658 829 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms