RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 MINPP1Q9UNW1 487 aa15.98■□□□□ 0.15
CHGA-203ENST00000553866 RAD17O75943 681 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 UFL1O94874 794 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
CHGA-203ENST00000553866 SCNN1DP51172 638 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 LMBR1LQ6UX01 489 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 CDC5LQ99459 802 aaKnown RBP15.97■□□□□ 0.15
CHGA-203ENST00000553866 DBNDD1Q9H9R9 158 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 KCNQ5Q9NR82 932 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
CHGA-203ENST00000553866 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
CHGA-203ENST00000553866 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
CHGA-203ENST00000553866 UTYO14607 1347 aa15.96■□□□□ 0.15
CHGA-203ENST00000553866 EPS15P42566 896 aa15.96■□□□□ 0.15
CHGA-203ENST00000553866 SCN9AQ15858 1988 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
CHGA-203ENST00000553866 HTRA3P83110 453 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 ZNF594Q96JF6 807 aaPredicted RBP15.95■□□□□ 0.14
CHGA-203ENST00000553866 USP44Q9H0E7 712 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 HACL1Q9UJ83 578 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 TNNQ9UQP3 1299 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 CHMP3Q9Y3E7 222 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 ADAMTSL1Q8N6G6 1762 aa15.95■□□□□ 0.14
CHGA-203ENST00000553866 XDHP47989 1333 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 IQCA1LA6NCM1 817 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 SNAP23O00161 211 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 BCAR3O75815 825 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 EPHX2P34913 555 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
CHGA-203ENST00000553866 FSTL1Q12841 308 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 SMC1BQ8NDV3 1235 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 EYA3Q99504 573 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 A0A1B0GUL6 1792 aa15.94■□□□□ 0.14
CHGA-203ENST00000553866 SHTN1A0MZ66 631 aa15.93■□□□□ 0.14
CHGA-203ENST00000553866 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
CHGA-203ENST00000553866 ECE2O60344 883 aa15.93■□□□□ 0.14
CHGA-203ENST00000553866 KLRK1P26718 216 aa15.93■□□□□ 0.14
CHGA-203ENST00000553866 GMPSP49915 693 aaPredicted RBP15.93■□□□□ 0.14
CHGA-203ENST00000553866 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
CHGA-203ENST00000553866 CIAPIN1Q6FI81 312 aa15.93■□□□□ 0.14
CHGA-203ENST00000553866 ANKRD44Q8N8A2 993 aa15.93■□□□□ 0.14
CHGA-203ENST00000553866 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
CHGA-203ENST00000553866 BICC1Q9H694 974 aaKnown RBP15.93■□□□□ 0.14
CHGA-203ENST00000553866 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
CHGA-203ENST00000553866 PSMD14O00487 310 aa15.92■□□□□ 0.14
CHGA-203ENST00000553866 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
CHGA-203ENST00000553866 CCT4P50991 539 aaKnown RBP15.92■□□□□ 0.14
CHGA-203ENST00000553866 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
CHGA-203ENST00000553866 CHADLQ6NUI6 762 aa15.92■□□□□ 0.14
CHGA-203ENST00000553866 TXNRD3Q86VQ6 643 aa15.92■□□□□ 0.14
CHGA-203ENST00000553866 HELBQ8NG08 1087 aaPredicted RBP15.92■□□□□ 0.14
CHGA-203ENST00000553866 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
CHGA-203ENST00000553866 CHRNDQ07001 517 aa15.91■□□□□ 0.14
CHGA-203ENST00000553866 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
CHGA-203ENST00000553866 GPRC5DQ9NZD1 345 aa15.91■□□□□ 0.14
CHGA-203ENST00000553866 TAF5LO75529 589 aa15.9■□□□□ 0.14
CHGA-203ENST00000553866 TNIP1Q15025 636 aa15.9■□□□□ 0.14
CHGA-203ENST00000553866 CCDC57Q2TAC2 916 aa15.9■□□□□ 0.14
CHGA-203ENST00000553866 RABL6Q3YEC7 729 aaPredicted RBP15.9■□□□□ 0.14
CHGA-203ENST00000553866 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
CHGA-203ENST00000553866 PUS3Q9BZE2 481 aaKnown RBP15.9■□□□□ 0.14
CHGA-203ENST00000553866 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
CHGA-203ENST00000553866 MAP1SQ66K74 1059 aaPredicted RBP15.89■□□□□ 0.13
CHGA-203ENST00000553866 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
CHGA-203ENST00000553866 CLEC11AQ9Y240 323 aa15.89■□□□□ 0.13
CHGA-203ENST00000553866 IRS2Q9Y4H2 1338 aa15.89■□□□□ 0.13
CHGA-203ENST00000553866 ZNF646O15015 1829 aaPredicted RBP15.89■□□□□ 0.13
CHGA-203ENST00000553866 MED23Q9ULK4 1368 aa15.88■□□□□ 0.13
CHGA-203ENST00000553866 APLP1P51693 650 aa15.88■□□□□ 0.13
CHGA-203ENST00000553866 HIRAP54198 1017 aaPredicted RBP15.88■□□□□ 0.13
CHGA-203ENST00000553866 LDHAL6AQ6ZMR3 332 aa15.88■□□□□ 0.13
CHGA-203ENST00000553866 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
CHGA-203ENST00000553866 PSME4Q14997 1843 aa15.88■□□□□ 0.13
CHGA-203ENST00000553866 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
CHGA-203ENST00000553866 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
CHGA-203ENST00000553866 EGFRP00533 1210 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 TRIM27P14373 513 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 FMR1Q06787 632 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHGA-203ENST00000553866 PNMA8AQ86V59 439 aaPredicted RBP15.87■□□□□ 0.13
CHGA-203ENST00000553866 DNAJC5GQ8N7S2 189 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 TRPM4Q8TD43 1214 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 ARHGAP45Q92619 1136 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
CHGA-203ENST00000553866 ANKRD2Q9GZV1 360 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 CNOT7Q9UIV1 285 aaKnown RBP15.87■□□□□ 0.13
CHGA-203ENST00000553866 LEMD3Q9Y2U8 911 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 KIF16BQ96L93 1317 aa15.87■□□□□ 0.13
CHGA-203ENST00000553866 G3V3G9 751 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 PLIN1O60240 522 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
CHGA-203ENST00000553866 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 CLUAP1Q96AJ1 413 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 MEIS3Q99687 375 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
CHGA-203ENST00000553866 ADARB2Q9NS39 739 aaKnown RBP15.86■□□□□ 0.13
CHGA-203ENST00000553866 RFX5P48382 616 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms